Difference between revisions of "ExchangeSeed-CO+2"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9514 RXN-9514] == * direction: ** left-to-right * common-name: ** acetoacetyl-[acyl-carrier pro...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MONOPHENOL-MONOOXYGENASE-RXN MONOPHENOL-MONOOXYGENASE-RXN] == * direction: ** left-to-right * commo...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MONOPHENOL-MONOOXYGENASE-RXN MONOPHENOL-MONOOXYGENASE-RXN] == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** tyrosinase |
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* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/1.14.18.1 ec-1.14.18.1] |
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== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[TYR]][c] '''=>''' 1 [[DOPAQUINONE]][c] '''+''' 1 [[WATER]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | + | * Gene: [[SJ10614]] | |
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− | * Gene: [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[SJ06533]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | * Gene: [[ | + | * Gene: [[SJ06532]] |
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** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[SJ04618]] |
− | ** Category: [[ | + | ** Category: [[orthology]] |
− | *** Source: [[ | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
− | + | * Gene: [[SJ18841]] | |
− | + | ** Category: [[orthology]] | |
− | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | |
− | * Gene: [[ | ||
− | ** Category: [[ | ||
− | *** Source: [[ | ||
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== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[PWY-7917]], pheomelanin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7917 PWY-7917] |
− | ** ''' | + | ** '''1''' reactions found over '''8''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-6481]], L-dopa and L-dopachrome biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6481 PWY-6481] |
− | + | ** '''1''' reactions found over '''3''' reactions in the full pathway | |
− | |||
− | ** ''' | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18118 18118] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R02078 R02078] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/P06845 P06845] | ||
+ | ** [http://www.uniprot.org/uniprot/P33180 P33180] | ||
+ | ** [http://www.uniprot.org/uniprot/P07524 P07524] | ||
+ | ** [http://www.uniprot.org/uniprot/Q04604 Q04604] | ||
+ | ** [http://www.uniprot.org/uniprot/P55024 P55024] | ||
+ | ** [http://www.uniprot.org/uniprot/Q00234 Q00234] | ||
+ | ** [http://www.uniprot.org/uniprot/P14679 P14679] | ||
+ | ** [http://www.uniprot.org/uniprot/P11344 P11344] | ||
+ | ** [http://www.uniprot.org/uniprot/Q91XK0 Q91XK0] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=tyrosinase}} |
− | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-1.14.18.1}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=5}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=2}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
− | {{#set: reconstruction tool=pathwaytools | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 14:26, 26 August 2019
Contents
Reaction MONOPHENOL-MONOOXYGENASE-RXN
- direction:
- left-to-right
- common-name:
- tyrosinase
- ec-number:
Reaction formula
- 1 OXYGEN-MOLECULE[c] + 1 TYR[c] => 1 DOPAQUINONE[c] + 1 WATER[c]
Gene(s) associated with this reaction
- Gene: SJ10614
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ06533
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ06532
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ04618
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ18841
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWY-7917, pheomelanin biosynthesis: PWY-7917
- 1 reactions found over 8 reactions in the full pathway
- PWY-6481, L-dopa and L-dopachrome biosynthesis: PWY-6481
- 1 reactions found over 3 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: