Difference between revisions of "ExchangeSeed-COB-I-ALAMIN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5426 PWY-5426] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-47...")
(Created page with "Category:reaction == Reaction RXN-2562 == * direction: ** left-to-right * common-name: ** δ-tocopherol methyltransferase * ec-number: ** [http://enzyme.expasy.org/EC...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5426 PWY-5426] ==
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== Reaction RXN-2562 ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-4751 tax-4751]
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** left-to-right
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-3524 tax-3524]
 
 
* common-name:
 
* common-name:
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** betaxanthin biosynthesis
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** δ-tocopherol methyltransferase
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== Reaction(s) found ==
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* ec-number:
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* [[RXN66-221]]
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** [http://enzyme.expasy.org/EC/2.1.1.95 ec-2.1.1.95]
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== Reaction(s) not found ==
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8567 RXN-8567]
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* 1 [[DELTA-TOCOPHEROL]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[BETA-TOCOPHEROL]][c] '''+''' 1 [[PROTON]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN6666-7 RXN6666-7]
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== Gene(s) associated with this reaction  ==
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{{#set: taxonomic-range=tax-3524|tax-4751}}
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* Gene: [[SJ10416]]
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{{#set: common-name=betaxanthin biosynthesis}}
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** Category: [[annotation]]
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{{#set: nb reaction found=1}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: completion rate=0.33}}
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** Category: [[orthology]]
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{{#set: nb total reaction=3}}
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Pathway(s) ==
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* [[PWY-1422]], vitamin E biosynthesis (tocopherols):
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** '''5''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R07504 R07504]
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{{#set: direction=left-to-right}}
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{{#set: common-name=δ-tocopherol methyltransferase}}
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{{#set: ec-number=ec-2.1.1.95}}
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{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana}}

Revision as of 20:46, 18 December 2020

Reaction RXN-2562

  • direction:
    • left-to-right
  • common-name:
    • δ-tocopherol methyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-1422, vitamin E biosynthesis (tocopherols):
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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