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| | [[Category:reaction]] | | [[Category:reaction]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN] == | + | == Reaction ExchangeSeed-CU+ == |
| | * direction: | | * direction: |
| − | ** left-to-right | + | ** reversible |
| − | * ec-number:
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| − | ** [http://enzyme.expasy.org/EC/2.1.1.104 ec-2.1.1.104]
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| | == Reaction formula == | | == Reaction formula == |
| − | * 1 [[CAFFEOYL-COA]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[FERULOYL-COA]][c] '''+''' 1 [[PROTON]][c] | + | * 1.0 [[CU+]][C-BOUNDARY] '''<=>''' 1.0 [[CU+]][e] |
| | == Gene(s) associated with this reaction == | | == Gene(s) associated with this reaction == |
| − | * Gene: [[SJ01911]]
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| − | ** Category: [[orthology]]
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| − | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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| | == Pathway(s) == | | == Pathway(s) == |
| − | * [[PWY-361]], phenylpropanoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361]
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| − | ** '''7''' reactions found over '''15''' reactions in the full pathway
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| − | * [[PWY-7398]], coumarins biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7398 PWY-7398]
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| − | ** '''3''' reactions found over '''13''' reactions in the full pathway
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| − | * [[PWY-5710]], capsaicin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5710 PWY-5710]
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| − | ** '''1''' reactions found over '''6''' reactions in the full pathway
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| − | * [[PWY-6792]], scopoletin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6792 PWY-6792]
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| − | ** '''1''' reactions found over '''3''' reactions in the full pathway
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| − | * [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
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| − | ** '''9''' reactions found over '''19''' reactions in the full pathway
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| − | * [[PWY-7498]], phenylpropanoids methylation (ice plant): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7498 PWY-7498]
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| − | ** '''2''' reactions found over '''10''' reactions in the full pathway
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| − | * [[PWY-6039]], chlorogenic acid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6039 PWY-6039]
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| − | ** '''1''' reactions found over '''7''' reactions in the full pathway
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| | == Reconstruction information == | | == Reconstruction information == |
| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | + | * category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment |
| − | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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| | == External links == | | == External links == |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| + | {{#set: direction=reversible}} |
| − | * RHEA:
| + | {{#set: nb gene associated=0}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16926 16926]
| + | {{#set: nb pathway associated=0}} |
| − | * LIGAND-RXN:
| + | {{#set: reconstruction category=manual}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R01942 R01942]
| + | {{#set: reconstruction tool=curation}} |
| − | * UNIPROT:
| + | {{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}} |
| − | ** [http://www.uniprot.org/uniprot/P28034 P28034]
| + | {{#set: reconstruction source=import_from_medium}} |
| − | ** [http://www.uniprot.org/uniprot/O65307 O65307]
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| − | ** [http://www.uniprot.org/uniprot/Q42945 Q42945]
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| − | ** [http://www.uniprot.org/uniprot/O24144 O24144]
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| − | ** [http://www.uniprot.org/uniprot/O24149 O24149]
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| − | ** [http://www.uniprot.org/uniprot/O24150 O24150]
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| − | ** [http://www.uniprot.org/uniprot/O24151 O24151]
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| − | ** [http://www.uniprot.org/uniprot/O04899 O04899]
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| − | ** [http://www.uniprot.org/uniprot/O49499 O49499]
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| − | ** [http://www.uniprot.org/uniprot/Q9SVI7 Q9SVI7]
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| − | ** [http://www.uniprot.org/uniprot/Q40313 Q40313]
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| − | ** [http://www.uniprot.org/uniprot/Q43095 Q43095]
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| − | ** [http://www.uniprot.org/uniprot/O04854 O04854]
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| − | ** [http://www.uniprot.org/uniprot/O65162 O65162]
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| − | ** [http://www.uniprot.org/uniprot/O65362 O65362]
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| − | </div>
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| − | {{#set: direction=left-to-right}} | |
| − | {{#set: ec-number=ec-2.1.1.104}}
| |
| − | {{#set: nb gene associated=1}} | |
| − | {{#set: nb pathway associated=7}} | |
| − | {{#set: reconstruction category=orthology}} | |
| − | {{#set: reconstruction tool=pantograph}} | |
| − | {{#set: reconstruction comment=n.a}} | |
| − | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}} | |
