Difference between revisions of "ExchangeSeed-EDTA"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NADPYROPHOSPHAT-RXN NADPYROPHOSPHAT-RXN] == * direction: ** left-to-right * common-name: ** nad+ di...")
(Created page with "Category:reaction == Reaction ExchangeSeed-EDTA == * direction: ** reversible == Reaction formula == * 1.0 EDTA[C-BOUNDARY] '''<=>''' 1.0 EDTA[e] == Gene(s) associ...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NADPYROPHOSPHAT-RXN NADPYROPHOSPHAT-RXN] ==
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== Reaction ExchangeSeed-EDTA ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
* common-name:
 
** nad+ diphosphatase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/3.6.1.22 ec-3.6.1.22]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[NICOTINAMIDE_NUCLEOTIDE]][c] '''+''' 2 [[PROTON]][c]
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* 1.0 [[EDTA]][C-BOUNDARY] '''<=>''' 1.0 [[EDTA]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ22529]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[NAD-BIOSYNTHESIS-II]], NAD salvage pathway III (to nicotinamide riboside): [http://metacyc.org/META/NEW-IMAGE?object=NAD-BIOSYNTHESIS-II NAD-BIOSYNTHESIS-II]
 
** '''4''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-7761]], NAD salvage pathway II (PNC IV cycle): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7761 PWY-7761]
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-5381]], pyridine nucleotide cycling (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5381 PWY-5381]
 
** '''6''' reactions found over '''11''' reactions in the full pathway
 
* [[PYRIDNUCSAL-PWY]], NAD salvage pathway I (PNC VI cycle): [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSAL-PWY PYRIDNUCSAL-PWY]
 
** '''4''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: direction=reversible}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11801 11801]
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{{#set: nb gene associated=0}}
* LIGAND-RXN:
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{{#set: nb pathway associated=0}}
** [http://www.genome.jp/dbget-bin/www_bget?R00103 R00103]
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{{#set: reconstruction category=manual}}
{{#set: direction=left-to-right}}
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{{#set: reconstruction tool=curation}}
{{#set: common-name=nad+ diphosphatase}}
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
{{#set: ec-number=ec-3.6.1.22}}
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{{#set: reconstruction source=import_from_medium}}
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=4}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 

Latest revision as of 11:19, 18 March 2021

Reaction ExchangeSeed-EDTA

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links