Difference between revisions of "ExchangeSeed-EDTA"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7647 RXN-7647] == * direction: ** left-to-right * common-name: ** chalcone isomerase * ec-numbe...")
(Created page with "Category:reaction == Reaction ExchangeSeed-EDTA == * direction: ** reversible == Reaction formula == * 1.0 EDTA[C-BOUNDARY] '''<=>''' 1.0 EDTA[e] == Gene(s) associ...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7647 RXN-7647] ==
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== Reaction ExchangeSeed-EDTA ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
* common-name:
 
** chalcone isomerase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/5.5.1.6 ec-5.5.1.6]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-6993]][c] '''=>''' 1 [[CPD-6991]][c] '''+''' 1 [[PROTON]][c]
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* 1.0 [[EDTA]][C-BOUNDARY] '''<=>''' 1.0 [[EDTA]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ20427]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ09285]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5059]], pinobanksin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5059 PWY-5059]
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
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{{#set: direction=reversible}}
** [http://www.genome.jp/dbget-bin/www_bget?R07990 R07990]
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{{#set: nb gene associated=0}}
{{#set: direction=left-to-right}}
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{{#set: nb pathway associated=0}}
{{#set: common-name=chalcone isomerase}}
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{{#set: reconstruction category=manual}}
{{#set: ec-number=ec-5.5.1.6}}
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{{#set: reconstruction tool=curation}}
{{#set: nb gene associated=2}}
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
{{#set: nb pathway associated=1}}
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{{#set: reconstruction source=import_from_medium}}
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Latest revision as of 11:19, 18 March 2021

Reaction ExchangeSeed-EDTA

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links