Difference between revisions of "ExchangeSeed-FE+2"

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(Created page with "Category:reaction == Reaction GLUCONOKIN-RXN == * direction: ** left-to-right * common-name: ** d-gluconate kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.12 ec...")
(Created page with "Category:reaction == Reaction RXN-13299 == * direction: ** left-to-right * common-name: ** 3-oxo-behenoyl-coa reductase * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1....")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLUCONOKIN-RXN ==
+
== Reaction RXN-13299 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** d-gluconate kinase
+
** 3-oxo-behenoyl-coa reductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.12 ec-2.7.1.12]
+
** [http://enzyme.expasy.org/EC/1.1.1.330 ec-1.1.1.330]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[GLUCONATE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CPD-2961]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-10283]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-14276]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ14827]]
+
* Gene: [[SJ06969]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5530]], sorbitol biosynthesis II:
+
* [[PWY-7036]], very long chain fatty acid biosynthesis II:
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''14''' reactions found over '''16''' reactions in the full pathway
−
* [[IDNCAT-PWY]], L-idonate degradation:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[GLUCONSUPER-PWY]], D-gluconate degradation:
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19434 19434]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01737 R01737]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P12011 P12011]
 
−
** [http://www.uniprot.org/uniprot/Q9JRF7 Q9JRF7]
 
−
** [http://www.uniprot.org/uniprot/Q8X6W0 Q8X6W0]
 
−
** [http://www.uniprot.org/uniprot/Q9CDN5 Q9CDN5]
 
−
** [http://www.uniprot.org/uniprot/P39208 P39208]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=d-gluconate kinase}}
+
{{#set: common-name=3-oxo-behenoyl-coa reductase}}
−
{{#set: ec-number=ec-2.7.1.12}}
+
{{#set: ec-number=ec-1.1.1.330}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:01, 5 January 2021

Reaction RXN-13299

  • direction:
    • left-to-right
  • common-name:
    • 3-oxo-behenoyl-coa reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7036, very long chain fatty acid biosynthesis II:
    • 14 reactions found over 16 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=ExchangeSeed-FE%2B2&oldid=62075"