Difference between revisions of "ExchangeSeed-K+"

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(Created page with "Category:reaction == Reaction RXN-13061 == * direction: ** left-to-right * common-name: ** l-dopa oxidase (membrane-bound) * ec-number: ** [http://enzyme.expasy.org/EC/1.1...")
(Created page with "Category:reaction == Reaction ExchangeSeed-K+ == * direction: ** reversible == Reaction formula == * 1.0 K+[C-BOUNDARY] '''<=>''' 1.0 K+[e] == Gene(s) associated w...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-13061 ==
+
== Reaction ExchangeSeed-K+ ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
* common-name:
 
** l-dopa oxidase (membrane-bound)
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.10.3 ec-1.10.3]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 2 [[L-DIHYDROXY-PHENYLALANINE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 2 [[DOPAQUINONE]][c] '''+''' 2 [[WATER]][c]
+
* 1.0 [[K+]][C-BOUNDARY] '''<=>''' 1.0 [[K+]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ06532]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ10614]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ06533]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ04618]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ18841]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5399]], betacyanin biosynthesis:
 
** '''2''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* METANETX-RXN : MNXR106355
+
{{#set: direction=reversible}}
* RHEA:
+
{{#set: nb gene associated=0}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34288 34288]
+
{{#set: nb pathway associated=0}}
* LIGAND-RXN:
+
{{#set: reconstruction category=manual}}
** [http://www.genome.jp/dbget-bin/www_bget?R00045 R00045]
+
{{#set: reconstruction tool=curation}}
{{#set: direction=left-to-right}}
+
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
{{#set: common-name=l-dopa oxidase (membrane-bound)}}
+
{{#set: reconstruction source=import_from_medium}}
{{#set: ec-number=ec-1.10.3}}
 
{{#set: nb gene associated=5}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Latest revision as of 11:19, 18 March 2021

Reaction ExchangeSeed-K+

  • direction:
    • reversible

Reaction formula

  • 1.0 K+[C-BOUNDARY] <=> 1.0 K+[e]

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links