Difference between revisions of "ExchangeSeed-Light"

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(Created page with "Category:reaction == Reaction 2.1.1.113-RXN == * direction: ** left-to-right * common-name: ** site-specific dna-methyltransferase (cytosine-n4-specific) * ec-number: ** [...")
(Created page with "Category:reaction == Reaction ExchangeSeed-Light == * direction: ** reversible == Reaction formula == * 1.0 Light[C-BOUNDARY] '''<=>''' 1.0 Light[e] == Gene(s) ass...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction 2.1.1.113-RXN ==
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== Reaction ExchangeSeed-Light ==
 
* direction:
 
* direction:
−
** left-to-right
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** reversible
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* common-name:
 
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** site-specific dna-methyltransferase (cytosine-n4-specific)
 
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/2.1.1.113 ec-2.1.1.113]
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[DNA-Cytosines]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[DNA-N4-Methylcytosine]][c] '''+''' 1 [[PROTON]][c]
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* 1.0 [[Light]][C-BOUNDARY] '''<=>''' 1.0 [[Light]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ01551]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ10173]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ09110]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: direction=reversible}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03003 R03003]
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{{#set: nb gene associated=0}}
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/Q04845 Q04845]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=site-specific dna-methyltransferase (cytosine-n4-specific)}}
 
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{{#set: ec-number=ec-2.1.1.113}}
 
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{{#set: nb gene associated=3}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction tool=curation}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
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{{#set: reconstruction source=import_from_medium}}

Latest revision as of 11:23, 18 March 2021

Reaction ExchangeSeed-Light

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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