Difference between revisions of "ExchangeSeed-Light"

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(Created page with "Category:reaction == Reaction 2-KETO-ADIPATE-DEHYDROG-RXN == * direction: ** left-to-right == Reaction formula == * 1 2K-ADIPATE[c] '''+''' 1 CO-A[c] '''+''' 1 N...")
(Created page with "Category:reaction == Reaction ExchangeSeed-Light == * direction: ** reversible == Reaction formula == * 1.0 Light[C-BOUNDARY] '''<=>''' 1.0 Light[e] == Gene(s) ass...")
 
(4 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction 2-KETO-ADIPATE-DEHYDROG-RXN ==
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== Reaction ExchangeSeed-Light ==
 
* direction:
 
* direction:
−
** left-to-right
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** reversible
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[2K-ADIPATE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[GLUTARYL-COA]][c] '''+''' 1 [[NADH]][c]
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* 1.0 [[Light]][C-BOUNDARY] '''<=>''' 1.0 [[Light]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ19201]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ13629]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ06474]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5652]], 2-amino-3-carboxymuconate semialdehyde degradation to glutaryl-CoA:
 
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** '''2''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY66-425]], L-lysine degradation II (L-pipecolate pathway):
 
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** '''1''' reactions found over '''9''' reactions in the full pathway
 
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* [[LYSINE-DEG1-PWY]], L-lysine degradation XI (mammalian):
 
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** '''2''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
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{{#set: direction=reversible}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30796 30796]
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{{#set: nb gene associated=0}}
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* LIGAND-RXN:
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{{#set: nb pathway associated=0}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01933 R01933]
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{{#set: reconstruction category=manual}}
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{{#set: direction=left-to-right}}
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{{#set: reconstruction tool=curation}}
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{{#set: nb gene associated=3}}
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
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{{#set: nb pathway associated=3}}
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{{#set: reconstruction source=import_from_medium}}
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{{#set: reconstruction category=orthology}}
 
−
{{#set: reconstruction tool=pantograph}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
 

Latest revision as of 11:23, 18 March 2021

Reaction ExchangeSeed-Light

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=ExchangeSeed-Light&oldid=142249"