Difference between revisions of "ExchangeSeed-MN+2"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALLANTOICASE-RXN ALLANTOICASE-RXN] == * direction: ** left-to-right * common-name: ** allantoicase...")
(Created page with "Category:reaction == Reaction ExchangeSeed-MN+2 == * direction: ** reversible == Reaction formula == * 1.0 MN+2[C-BOUNDARY] '''<=>''' 1.0 MN+2[e] == Gene(s) associ...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALLANTOICASE-RXN ALLANTOICASE-RXN] ==
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== Reaction ExchangeSeed-MN+2 ==
 
* direction:
 
* direction:
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** left-to-right
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** reversible
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* common-name:
 
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** allantoicase
 
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/3.5.3.4 ec-3.5.3.4]
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[ALLANTOATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-1091]][c] '''+''' 1 [[UREA]][c]
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* 1.0 [[MN+2]][C-BOUNDARY] '''<=>''' 1.0 [[MN+2]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ11493]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-5697]], allantoin degradation to ureidoglycolate I (urea producing): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5697 PWY-5697]
 
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** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: direction=reversible}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11017 11017]
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{{#set: nb gene associated=0}}
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* LIGAND-RXN:
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{{#set: nb pathway associated=0}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02422 R02422]
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{{#set: reconstruction category=manual}}
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* UNIPROT:
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{{#set: reconstruction tool=curation}}
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** [http://www.uniprot.org/uniprot/P18407 P18407]
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
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** [http://www.uniprot.org/uniprot/P25335 P25335]
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{{#set: reconstruction source=import_from_medium}}
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** [http://www.uniprot.org/uniprot/Q09913 Q09913]
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=allantoicase}}
 
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{{#set: ec-number=ec-3.5.3.4}}
 
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{{#set: nb gene associated=1}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}}
 

Latest revision as of 11:18, 18 March 2021

Reaction ExchangeSeed-MN+2

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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