Difference between revisions of "ExchangeSeed-MN+2"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRAISOM-RXN PRAISOM-RXN] == * direction: ** left-to-right * common-name: ** phosphoribosylanthranil...")
 
(Created page with "Category:reaction == Reaction ExchangeSeed-MN+2 == * direction: ** reversible == Reaction formula == * 1.0 MN+2[C-BOUNDARY] '''<=>''' 1.0 MN+2[e] == Gene(s) associ...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRAISOM-RXN PRAISOM-RXN] ==
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== Reaction ExchangeSeed-MN+2 ==
 
* direction:
 
* direction:
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** left-to-right
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** reversible
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* common-name:
 
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** phosphoribosylanthranilate isomerase
 
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/5.3.1.24 ec-5.3.1.24]
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[N-5-PHOSPHORIBOSYL-ANTHRANILATE]][c] '''=>''' 1 [[CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P]][c]
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* 1.0 [[MN+2]][C-BOUNDARY] '''<=>''' 1.0 [[MN+2]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ17722]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ01083]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[TRPSYN-PWY]], L-tryptophan biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TRPSYN-PWY TRPSYN-PWY]
 
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** '''6''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: direction=reversible}}
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* RHEA:
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{{#set: nb gene associated=0}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21541 21541]
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{{#set: nb pathway associated=0}}
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* LIGAND-RXN:
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{{#set: reconstruction category=manual}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03509 R03509]
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{{#set: reconstruction tool=curation}}
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* UNIPROT:
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
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** [http://www.uniprot.org/uniprot/P16923 P16923]
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{{#set: reconstruction source=import_from_medium}}
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** [http://www.uniprot.org/uniprot/O67853 O67853]
 
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** [http://www.uniprot.org/uniprot/P12289 P12289]
 
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** [http://www.uniprot.org/uniprot/P42393 P42393]
 
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** [http://www.uniprot.org/uniprot/Q9PIF3 Q9PIF3]
 
−
** [http://www.uniprot.org/uniprot/Q57893 Q57893]
 
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** [http://www.uniprot.org/uniprot/P20167 P20167]
 
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** [http://www.uniprot.org/uniprot/Q9JVD1 Q9JVD1]
 
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** [http://www.uniprot.org/uniprot/P00910 P00910]
 
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** [http://www.uniprot.org/uniprot/P00909 P00909]
 
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** [http://www.uniprot.org/uniprot/P00912 P00912]
 
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** [http://www.uniprot.org/uniprot/P13997 P13997]
 
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** [http://www.uniprot.org/uniprot/P50857 P50857]
 
−
** [http://www.uniprot.org/uniprot/P27710 P27710]
 
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** [http://www.uniprot.org/uniprot/P17218 P17218]
 
−
** [http://www.uniprot.org/uniprot/P00908 P00908]
 
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** [http://www.uniprot.org/uniprot/P18483 P18483]
 
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** [http://www.uniprot.org/uniprot/Q02002 Q02002]
 
−
** [http://www.uniprot.org/uniprot/Q56320 Q56320]
 
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** [http://www.uniprot.org/uniprot/Q01128 Q01128]
 
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** [http://www.uniprot.org/uniprot/P74435 P74435]
 
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** [http://www.uniprot.org/uniprot/Q9YGB1 Q9YGB1]
 
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</div>
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=phosphoribosylanthranilate isomerase}}
 
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{{#set: ec-number=ec-5.3.1.24}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=orthology|annotation}}
 
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{{#set: reconstruction tool=pathwaytools|pantograph}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Latest revision as of 11:18, 18 March 2021

Reaction ExchangeSeed-MN+2

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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