Difference between revisions of "ExchangeSeed-NITRATE"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction HISTIDINE-AMMONIA-LYASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/4.3.1.3 ec-4.3.1.3] == Reaction for...")
(Created page with "Category:reaction == Reaction ExchangeSeed-PROTON == * direction: ** reversible == Reaction formula == * 1.0 PROTON[C-BOUNDARY] '''<=>''' 1.0 PROTON[e] == Gene(s)...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction HISTIDINE-AMMONIA-LYASE-RXN ==
+
== Reaction ExchangeSeed-PROTON ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/4.3.1.3 ec-4.3.1.3]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[HIS]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[UROCANATE]][c]
+
* 1.0 [[PROTON]][C-BOUNDARY] '''<=>''' 1.0 [[PROTON]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07221]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[HISDEG-PWY]], L-histidine degradation I:
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5028]], L-histidine degradation II:
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5030]], L-histidine degradation III:
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[HISHP-PWY]], L-histidine degradation VI:
 
−
** '''1''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=reversible}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21233 21233]
+
{{#set: nb gene associated=0}}
−
* LIGAND-RXN:
+
{{#set: nb pathway associated=0}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01168 R01168]
+
{{#set: reconstruction category=manual}}
−
* UNIPROT:
+
{{#set: reconstruction tool=curation}}
−
** [http://www.uniprot.org/uniprot/P21310 P21310]
+
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
−
** [http://www.uniprot.org/uniprot/P21213 P21213]
+
{{#set: reconstruction source=import_from_medium}}
−
** [http://www.uniprot.org/uniprot/P35492 P35492]
 
−
** [http://www.uniprot.org/uniprot/Q9RZ06 Q9RZ06]
 
−
** [http://www.uniprot.org/uniprot/P24221 P24221]
 
−
** [http://www.uniprot.org/uniprot/P42357 P42357]
 
−
** [http://www.uniprot.org/uniprot/Q20502 Q20502]
 
−
** [http://www.uniprot.org/uniprot/P10944 P10944]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: ec-number=ec-4.3.1.3}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=4}}
 
−
{{#set: reconstruction category=orthology}}
 
−
{{#set: reconstruction tool=pantograph}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}
 

Revision as of 11:20, 15 January 2021

Reaction ExchangeSeed-PROTON

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=ExchangeSeed-NITRATE&oldid=114090"