Difference between revisions of "ExchangeSeed-SULFATE"

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(Created page with "Category:reaction == Reaction GLUTAMIDOTRANS-RXN == * direction: ** left-to-right * common-name: ** imidazoleglycerol-phosphate synthase * ec-number: ** [http://enzyme.exp...")
(Created page with "Category:reaction == Reaction ExchangeSeed-SULFATE == * direction: ** reversible == Reaction formula == * 1.0 SULFATE[C-BOUNDARY] '''<=>''' 1.0 SULFATE[e] == Gene(...")
 
(One intermediate revision by the same user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction GLUTAMIDOTRANS-RXN ==
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== Reaction ExchangeSeed-SULFATE ==
 
* direction:
 
* direction:
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** left-to-right
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** reversible
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* common-name:
 
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** imidazoleglycerol-phosphate synthase
 
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/4.3.2.m2 ec-4.3.2.m2]
 
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* synonymous:
 
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** imidazole glycerol phosphate synthase cyclase subunit (ec 4.1.3.-)
 
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** imidazole glycerol phosphate synthase amidotransferase subunit (ec 2.4.2.-)
 
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** imidazole glycerol phosphate synthase cyclase subunit
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[GLN]][c] '''+''' 1 [[PHOSPHORIBULOSYL-FORMIMINO-AICAR-P]][c] '''=>''' 1 [[AICAR]][c] '''+''' 1 [[D-ERYTHRO-IMIDAZOLE-GLYCEROL-P]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[PROTON]][c]
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* 1.0 [[SULFATE]][C-BOUNDARY] '''<=>''' 1.0 [[SULFATE]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ19186]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ12953]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[HISTSYN-PWY]], L-histidine biosynthesis:
 
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** '''10''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: direction=reversible}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24793 24793]
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{{#set: nb gene associated=0}}
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* LIGAND-RXN:
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{{#set: nb pathway associated=0}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04558 R04558]
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{{#set: reconstruction category=manual}}
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{{#set: direction=left-to-right}}
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{{#set: reconstruction tool=curation}}
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{{#set: common-name=imidazoleglycerol-phosphate synthase}}
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
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{{#set: ec-number=ec-4.3.2.m2}}
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{{#set: reconstruction source=import_from_medium}}
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{{#set: synonymous=imidazole glycerol phosphate synthase amidotransferase subunit (ec 2.4.2.-)|imidazole glycerol phosphate synthase cyclase subunit|imidazole glycerol phosphate synthase cyclase subunit (ec 4.1.3.-)}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=pathwaytools|pantograph}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Latest revision as of 11:18, 18 March 2021

Reaction ExchangeSeed-SULFATE

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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