Difference between revisions of "ExchangeSeed-SULFATE"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOISOCAPROATE-RXN KETOISOCAPROATE-RXN] == * direction: ** left-to-right * common-name: ** 4-methy...")
(Created page with "Category:reaction == Reaction ExchangeSeed-SULFATE == * direction: ** reversible == Reaction formula == * 1.0 SULFATE[C-BOUNDARY] '''<=>''' 1.0 SULFATE[e] == Gene(...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOISOCAPROATE-RXN KETOISOCAPROATE-RXN] ==
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== Reaction ExchangeSeed-SULFATE ==
 
* direction:
 
* direction:
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** left-to-right
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** reversible
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* common-name:
 
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** 4-methyl-2-oxopentanoate dehydrogenase (lipoamide)
 
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/1.2.4.4 ec-1.2.4.4]
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[BCAA-dehydrogenase-lipoyl]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[BCAA-dehydrogenase-3MB-DH-lipoyl]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* 1.0 [[SULFATE]][C-BOUNDARY] '''<=>''' 1.0 [[SULFATE]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ11017]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[SJ18449]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: direction=reversible}}
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* UNIPROT:
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{{#set: nb gene associated=0}}
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** [http://www.uniprot.org/uniprot/P21839 P21839]
 
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** [http://www.uniprot.org/uniprot/P21953 P21953]
 
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** [http://www.uniprot.org/uniprot/P37940 P37940]
 
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** [http://www.uniprot.org/uniprot/Q9PK54 Q9PK54]
 
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** [http://www.uniprot.org/uniprot/P37941 P37941]
 
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** [http://www.uniprot.org/uniprot/P11178 P11178]
 
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** [http://www.uniprot.org/uniprot/P12694 P12694]
 
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** [http://www.uniprot.org/uniprot/P09061 P09061]
 
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** [http://www.uniprot.org/uniprot/P09060 P09060]
 
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** [http://www.uniprot.org/uniprot/P11960 P11960]
 
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** [http://www.uniprot.org/uniprot/O84344 O84344]
 
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** [http://www.uniprot.org/uniprot/Q9Z9E8 Q9Z9E8]
 
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** [http://www.uniprot.org/uniprot/Q9I1M2 Q9I1M2]
 
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** [http://www.uniprot.org/uniprot/P35738 P35738]
 
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** [http://www.uniprot.org/uniprot/P50136 P50136]
 
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** [http://www.uniprot.org/uniprot/O48615 O48615]
 
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** [http://www.uniprot.org/uniprot/O03849 O03849]
 
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** [http://www.uniprot.org/uniprot/Q53592 Q53592]
 
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** [http://www.uniprot.org/uniprot/Q53593 Q53593]
 
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** [http://www.uniprot.org/uniprot/O82450 O82450]
 
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</div>
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=4-methyl-2-oxopentanoate dehydrogenase (lipoamide)}}
 
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{{#set: ec-number=ec-1.2.4.4}}
 
−
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=import_from_medium}}

Latest revision as of 11:18, 18 March 2021

Reaction ExchangeSeed-SULFATE

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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