Difference between revisions of "ExchangeSeed-THIAMINE"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-469 RXN66-469] == * direction: ** left-to-right * common-name: ** 3-methyl-branched fatty acy...")
 
(Created page with "Category:reaction == Reaction ExchangeSeed-THIAMINE == * direction: ** reversible == Reaction formula == * 1.0 THIAMINE[C-BOUNDARY] '''<=>''' 1.0 THIAMINE[e] == Ge...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-469 RXN66-469] ==
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== Reaction ExchangeSeed-THIAMINE ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
* common-name:
 
** 3-methyl-branched fatty acyl-coa ligase
 
** 3-methyl-branched 2,3,4-saturated fatty acyl-coa ligase
 
** long-chain fatty acid-coa ligase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[3-Methyl-Saturated-Fatty-Acids]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[3-Methyl-Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
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* 1.0 [[THIAMINE]][C-BOUNDARY] '''<=>''' 1.0 [[THIAMINE]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* Gene: [[SJ08691]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ13972]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ08690]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ03650]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ08692]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ05591]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY66-387]], fatty acid &alpha;-oxidation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-387 PWY66-387]
 
** '''4''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
{{#set: direction=left-to-right}}
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{{#set: direction=reversible}}
{{#set: common-name=3-methyl-branched fatty acyl-coa ligase|long-chain fatty acid-coa ligase|3-methyl-branched 2,3,4-saturated fatty acyl-coa ligase}}
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{{#set: nb gene associated=0}}
{{#set: ec-number=ec-6.2.1.3}}
+
{{#set: nb pathway associated=0}}
{{#set: nb gene associated=6}}
+
{{#set: reconstruction category=manual}}
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction source=import_from_medium}}
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Latest revision as of 11:19, 18 March 2021

Reaction ExchangeSeed-THIAMINE

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links