Difference between revisions of "ExchangeSeed-THIAMINE"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.8.2.29-RXN 2.8.2.29-RXN] == * direction: ** left-to-right * common-name: ** [heparan sulfate]-glu...")
(Created page with "Category:reaction == Reaction ExchangeSeed-THIAMINE == * direction: ** reversible == Reaction formula == * 1.0 THIAMINE[C-BOUNDARY] '''<=>''' 1.0 THIAMINE[e] == Ge...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.8.2.29-RXN 2.8.2.29-RXN] ==
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== Reaction ExchangeSeed-THIAMINE ==
 
* direction:
 
* direction:
** left-to-right
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** reversible
* common-name:
 
** [heparan sulfate]-glucosamine 3-o-sulfotransferase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/2.8.2.29 ec-2.8.2.29]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Heparan-sulfate-D-GlcNS]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[Heparan-sulfate-3-N-disulfate]][c] '''+''' 1 [[PROTON]][c]
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* 1.0 [[THIAMINE]][C-BOUNDARY] '''<=>''' 1.0 [[THIAMINE]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ20108]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6558]], heparan sulfate biosynthesis (late stages): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6558 PWY-6558]
 
** '''7''' reactions found over '''13''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: direction=reversible}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15462 15462]
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{{#set: nb gene associated=0}}
{{#set: direction=left-to-right}}
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{{#set: nb pathway associated=0}}
{{#set: common-name=[heparan sulfate]-glucosamine 3-o-sulfotransferase}}
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{{#set: reconstruction category=manual}}
{{#set: ec-number=ec-2.8.2.29}}
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{{#set: reconstruction tool=curation}}
{{#set: nb gene associated=1}}
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
{{#set: nb pathway associated=1}}
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{{#set: reconstruction source=import_from_medium}}
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 

Latest revision as of 11:19, 18 March 2021

Reaction ExchangeSeed-THIAMINE

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links