Difference between revisions of "ExchangeSeed-WATER"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROOROTATE-DEHYDROGENASE-RXN DIHYDROOROTATE-DEHYDROGENASE-RXN] == * direction: ** left-to-right...")
 
(Created page with "Category:reaction == Reaction ExchangeSeed-WATER == * direction: ** reversible == Reaction formula == * 1.0 WATER[C-BOUNDARY] '''<=>''' 1.0 WATER[e] == Gene(s) ass...")
 
(9 intermediate revisions by 4 users not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROOROTATE-DEHYDROGENASE-RXN DIHYDROOROTATE-DEHYDROGENASE-RXN] ==
+
== Reaction ExchangeSeed-WATER ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
* common-name:
 
** dihydroorotate dehydrogenase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.3.5.2 ec-1.3.5.2]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[DI-H-OROTATE]][c] '''+''' 1 [[ETR-Quinones]][c] '''=>''' 1 [[ETR-Quinols]][c] '''+''' 1 [[OROTATE]][c]
+
* 1.0 [[WATER]][C-BOUNDARY] '''<=>''' 1.0 [[WATER]][e]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ18134]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5686]], UMP biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686]
 
** '''6''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from boundary to extracellular compartment
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: direction=reversible}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18074 18074]
+
{{#set: nb gene associated=0}}
* LIGAND-RXN:
+
{{#set: nb pathway associated=0}}
** [http://www.genome.jp/dbget-bin/www_bget?R01868 R01868]
+
{{#set: reconstruction category=manual}}
* UNIPROT:
+
{{#set: reconstruction tool=curation}}
** [http://www.uniprot.org/uniprot/O76140 O76140]
+
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
{{#set: direction=left-to-right}}
+
{{#set: reconstruction source=import_from_medium}}
{{#set: common-name=dihydroorotate dehydrogenase}}
 
{{#set: ec-number=ec-1.3.5.2}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 

Latest revision as of 11:20, 18 March 2021

Reaction ExchangeSeed-WATER

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links