Difference between revisions of "ExchangeSeed-WATER"

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(Created page with "Category:reaction == Reaction TRNA-URACIL-5--METHYLTRANSFERASE-RXN == * direction: ** left-to-right * common-name: ** trna(m5u54)methyltransferase * ec-number: ** [http://...")
(Created page with "Category:reaction == Reaction PNP-RXN == * direction: ** reversible * common-name: ** purine nucleoside phosphorylase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.1...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction TRNA-URACIL-5--METHYLTRANSFERASE-RXN ==
+
== Reaction PNP-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** trna(m5u54)methyltransferase
+
** purine nucleoside phosphorylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.35 ec-2.1.1.35]
+
** [http://enzyme.expasy.org/EC/2.4.2.1 ec-2.4.2.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[Uracil-54-in-tRNA]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[tRNA-containing-5Me-uridine54]][c]
+
* 1 [[Pi]][c] '''+''' 1 [[Purine-Ribonucleosides]][c] '''<=>''' 1 [[Purine-Bases]][c] '''+''' 1 [[RIBOSE-1P]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03220]]
+
* Gene: [[SJ03195]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42713 42713]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19808 19808]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00594 R00594]
+
** [http://www.genome.jp/dbget-bin/www_bget?R08368 R08368]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P23003 P23003]
+
** [http://www.uniprot.org/uniprot/P0ABP8 P0ABP8]
−
** [http://www.uniprot.org/uniprot/P31812 P31812]
+
** [http://www.uniprot.org/uniprot/P47724 P47724]
−
** [http://www.uniprot.org/uniprot/Q9PP92 Q9PP92]
+
** [http://www.uniprot.org/uniprot/P44417 P44417]
−
** [http://www.uniprot.org/uniprot/Q9JT82 Q9JT82]
+
** [http://www.uniprot.org/uniprot/Q9CH10 Q9CH10]
−
{{#set: direction=left-to-right}}
+
** [http://www.uniprot.org/uniprot/P46354 P46354]
−
{{#set: common-name=trna(m5u54)methyltransferase}}
+
** [http://www.uniprot.org/uniprot/P23492 P23492]
−
{{#set: ec-number=ec-2.1.1.35}}
+
** [http://www.uniprot.org/uniprot/P77834 P77834]
 +
** [http://www.uniprot.org/uniprot/P77835 P77835]
 +
** [http://www.uniprot.org/uniprot/P00491 P00491]
 +
** [http://www.uniprot.org/uniprot/Q05788 Q05788]
 +
** [http://www.uniprot.org/uniprot/P75053 P75053]
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=purine nucleoside phosphorylase}}
 +
{{#set: ec-number=ec-2.4.2.1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:03, 5 January 2021

Reaction PNP-RXN

  • direction:
    • reversible
  • common-name:
    • purine nucleoside phosphorylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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