Difference between revisions of "Exchange BIOMASS"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=OHMETPYRKIN-RXN OHMETPYRKIN-RXN] == * direction: ** left-to-right * common-name: ** hydroxymethylpy...")
 
(Created page with "Category:reaction == Reaction Exchange_BIOMASS == * direction: ** left-to-right == Reaction formula == * 1 BIOMASS[e] '''=>''' 1 BIOMASS[C-BOUNDARY] == Gene(s) ass...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=OHMETPYRKIN-RXN OHMETPYRKIN-RXN] ==
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== Reaction Exchange_BIOMASS ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
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* common-name:
 
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** hydroxymethylpyrimidine kinase
 
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/2.7.1.49 ec-2.7.1.49]
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[ATP]][c] '''+''' 1 [[HMP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[AMINO-HYDROXYMETHYL-METHYL-PYR-P]][c] '''+''' 1 [[PROTON]][c]
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* 1 [[BIOMASS]][e] '''=>''' 1 [[BIOMASS]][C-BOUNDARY]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ18183]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-6910]], hydroxymethylpyrimidine salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6910 PWY-6910]
 
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
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* [[PWY-7357]], thiamine formation from pyrithiamine and oxythiamine (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7357 PWY-7357]
 
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** '''4''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-7356]], thiamine salvage IV (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7356 PWY-7356]
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[biomass_reaction]]; tool: [[curation]]; comment: exchange biomass to boundary
 
== External links  ==
 
== External links  ==
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23097 23097]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R03471 R03471]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/O48881 O48881]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
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{{#set: common-name=hydroxymethylpyrimidine kinase}}
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{{#set: nb gene associated=0}}
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{{#set: ec-number=ec-2.7.1.49}}
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{{#set: nb pathway associated=0}}
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{{#set: nb gene associated=1}}
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{{#set: reconstruction category=manual}}
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{{#set: nb pathway associated=3}}
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{{#set: reconstruction tool=curation}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction comment=exchange biomass to boundary}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=biomass_reaction}}
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=saccharina_japonica_genome}}
 

Latest revision as of 11:21, 18 March 2021

Reaction Exchange_BIOMASS

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=Exchange_BIOMASS&oldid=141392"