Difference between revisions of "Exchange BIOMASS"

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(Created page with "Category:reaction == Reaction RXN-12477 == * direction: ** left-to-right * common-name: ** cytidine4 in trnapro 2'-o-methyltransferase * ec-number: ** [http://enzyme.expas...")
(Created page with "Category:reaction == Reaction Exchange_BIOMASS == * direction: ** left-to-right == Reaction formula == * 1 BIOMASS[e] '''=>''' 1 BIOMASS[C-BOUNDARY] == Gene(s) ass...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-12477 ==
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== Reaction Exchange_BIOMASS ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** cytidine4 in trnapro 2'-o-methyltransferase
 
* ec-number:
 
** [http://enzyme.expasy.org/EC/2.1.1.225 ec-2.1.1.225]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Pro-tRNA-Cytidine4]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pro-tRNA-2-O-MeCytidine4]][c]
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* 1 [[BIOMASS]][e] '''=>''' 1 [[BIOMASS]][C-BOUNDARY]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ07716]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6829]], tRNA methylation (yeast):
 
** '''11''' reactions found over '''15''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[biomass_reaction]]; tool: [[curation]]; comment: exchange biomass to boundary
 
== External links  ==
 
== External links  ==
* METANETX-RXN : MNXR117585
 
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32768 32768]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=cytidine4 in trnapro 2'-o-methyltransferase}}
+
{{#set: nb gene associated=0}}
{{#set: ec-number=ec-2.1.1.225}}
+
{{#set: nb pathway associated=0}}
{{#set: nb gene associated=1}}
+
{{#set: reconstruction category=manual}}
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction comment=exchange biomass to boundary}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=biomass_reaction}}
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 

Latest revision as of 11:21, 18 March 2021

Reaction Exchange_BIOMASS

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links