Difference between revisions of "Exchange BIOMASS"

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(Created page with "Category:reaction == Reaction GUANOSINE-DIPHOSPHATASE-RXN == * direction: ** left-to-right * common-name: ** guanosine-diphosphatase * ec-number: ** [http://enzyme.expasy....")
(Created page with "Category:reaction == Reaction Exchange_BIOMASS == * direction: ** left-to-right == Reaction formula == * 1 BIOMASS[e] '''=>''' 1 BIOMASS[C-BOUNDARY] == Gene(s) ass...")
 
(6 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction GUANOSINE-DIPHOSPHATASE-RXN ==
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== Reaction Exchange_BIOMASS ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** guanosine-diphosphatase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/3.6.1.42 ec-3.6.1.42]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GDP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
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* 1 [[BIOMASS]][e] '''=>''' 1 [[BIOMASS]][C-BOUNDARY]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ00842]]
 
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** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ16444]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[biomass_reaction]]; tool: [[curation]]; comment: exchange biomass to boundary
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22157 22157]
 
−
* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R00328 R00328]
 
−
* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P32621 P32621]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
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{{#set: common-name=guanosine-diphosphatase}}
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{{#set: nb gene associated=0}}
−
{{#set: ec-number=ec-3.6.1.42}}
 
−
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction category=manual}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction comment=exchange biomass to boundary}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}
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{{#set: reconstruction source=biomass_reaction}}

Latest revision as of 11:21, 18 March 2021

Reaction Exchange_BIOMASS

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=Exchange_BIOMASS&oldid=141392"