Difference between revisions of "FATTY-ACID-SYNTHASE-RXN"

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(Created page with "Category:reaction == Reaction 3-ISOPROPYLMALDEHYDROG-RXN == * direction: ** reversible * common-name: ** 3-isopropylmalate dehydrogenase * synonymous: ** threo-ds-3-isopro...")
(Created page with "Category:reaction == Reaction FATTY-ACID-SYNTHASE-RXN == * direction: ** left-to-right * common-name: ** fatty acid synthase * ec-number: ** [http://enzyme.expasy.org/EC/2...")
 
(6 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3-ISOPROPYLMALDEHYDROG-RXN ==
+
== Reaction FATTY-ACID-SYNTHASE-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** 3-isopropylmalate dehydrogenase
+
** fatty acid synthase
−
* synonymous:
+
* ec-number:
−
** threo-ds-3-isopropylmalate dehydrogenase
+
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
−
** β-isopropylmalic enzyme
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[CPD-7100]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ACETYL-COA]][c] '''+''' n [[MALONYL-COA]][c] '''+''' 2n [[NADPH]][c] '''+''' 2n [[PROTON]][c] '''=>''' n [[CARBON-DIOXIDE]][c] '''+''' (n+1) [[CO-A]][c] '''+''' 1 [[Long-Chain-Fatty-Acids]][c] '''+''' 2n [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ21291]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ06616]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ04443]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ15983]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ11672]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ10624]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ18059]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ00320]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ13014]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06944]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ03883]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ17743]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ19629]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06617]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ04769]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ00613]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[LEUSYN-PWY]], L-leucine biosynthesis:
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered):
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR109383
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10895 10895]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04426 R04426]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05188 R05188]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P05644 P05644]
+
** [http://www.uniprot.org/uniprot/P36189 P36189]
−
** [http://www.uniprot.org/uniprot/P05645 P05645]
+
** [http://www.uniprot.org/uniprot/P49327 P49327]
−
** [http://www.uniprot.org/uniprot/Q01987 Q01987]
+
** [http://www.uniprot.org/uniprot/P95029 P95029]
−
** [http://www.uniprot.org/uniprot/Q00412 Q00412]
+
** [http://www.uniprot.org/uniprot/P43098 P43098]
−
** [http://www.uniprot.org/uniprot/P08791 P08791]
+
** [http://www.uniprot.org/uniprot/Q48926 Q48926]
−
** [http://www.uniprot.org/uniprot/P30125 P30125]
+
** [http://www.uniprot.org/uniprot/P15368 P15368]
−
** [http://www.uniprot.org/uniprot/Q9PLW0 Q9PLW0]
+
** [http://www.uniprot.org/uniprot/P08757 P08757]
−
** [http://www.uniprot.org/uniprot/O66607 O66607]
+
** [http://www.uniprot.org/uniprot/P07855 P07855]
−
** [http://www.uniprot.org/uniprot/P12010 P12010]
+
** [http://www.uniprot.org/uniprot/Q04846 Q04846]
−
** [http://www.uniprot.org/uniprot/P04173 P04173]
+
** [http://www.uniprot.org/uniprot/Q59497 Q59497]
−
** [http://www.uniprot.org/uniprot/Q5SIY4 Q5SIY4]
+
** [http://www.uniprot.org/uniprot/P19097 P19097]
−
** [http://www.uniprot.org/uniprot/P24098 P24098]
+
** [http://www.uniprot.org/uniprot/P78866 P78866]
−
** [http://www.uniprot.org/uniprot/Q9JU79 Q9JU79]
+
** [http://www.uniprot.org/uniprot/Q10289 Q10289]
−
** [http://www.uniprot.org/uniprot/P43860 P43860]
+
** [http://www.uniprot.org/uniprot/P12276 P12276]
−
** [http://www.uniprot.org/uniprot/P41019 P41019]
+
** [http://www.uniprot.org/uniprot/P12785 P12785]
−
** [http://www.uniprot.org/uniprot/P54354 P54354]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/Q56268 Q56268]
+
{{#set: common-name=fatty acid synthase}}
−
** [http://www.uniprot.org/uniprot/P29102 P29102]
+
{{#set: ec-number=ec-2.3.1.85}}
−
** [http://www.uniprot.org/uniprot/P37412 P37412]
+
{{#set: nb gene associated=15}}
−
** [http://www.uniprot.org/uniprot/P23390 P23390]
+
{{#set: nb pathway associated=0}}
−
** [http://www.uniprot.org/uniprot/P29696 P29696]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P41766 P41766]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/Q02143 Q02143]
 
−
** [http://www.uniprot.org/uniprot/P34733 P34733]
 
−
** [http://www.uniprot.org/uniprot/P50180 P50180]
 
−
** [http://www.uniprot.org/uniprot/Q12591 Q12591]
 
−
** [http://www.uniprot.org/uniprot/Q12590 Q12590]
 
−
** [http://www.uniprot.org/uniprot/Q12592 Q12592]
 
−
** [http://www.uniprot.org/uniprot/P07139 P07139]
 
−
** [http://www.uniprot.org/uniprot/P41926 P41926]
 
−
** [http://www.uniprot.org/uniprot/P48012 P48012]
 
−
** [http://www.uniprot.org/uniprot/P87256 P87256]
 
−
** [http://www.uniprot.org/uniprot/P87257 P87257]
 
−
** [http://www.uniprot.org/uniprot/P73960 P73960]
 
−
** [http://www.uniprot.org/uniprot/O86504 O86504]
 
−
** [http://www.uniprot.org/uniprot/O85837 O85837]
 
−
** [http://www.uniprot.org/uniprot/P18869 P18869]
 
−
** [http://www.uniprot.org/uniprot/P34738 P34738]
 
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=3-isopropylmalate dehydrogenase}}
 
−
{{#set: synonymous=threo-ds-3-isopropylmalate dehydrogenase|&beta;-isopropylmalic enzyme}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=2}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction FATTY-ACID-SYNTHASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • fatty acid synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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