Difference between revisions of "FE3abch"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-330...")
(Created page with "Category:reaction == Reaction RXN-9361 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.163 ec-2.1.1.163] == Reaction formula == * 1 C...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581] ==
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== Reaction RXN-9361 ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-33090]
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** left-to-right
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* common-name:
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* ec-number:
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** indole-3-acetate biosynthesis ii
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** [http://enzyme.expasy.org/EC/2.1.1.163 ec-2.1.1.163]
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== Reaction(s) found ==
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== Reaction formula ==
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* [[AROMATIC-L-AMINO-ACID-DECARBOXYLASE-RXN]]
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* 1 [[CPD-12119]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-12127]][c] '''+''' 1 [[PROTON]][c]
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* [[RXN-1404]]
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== Gene(s) associated with this reaction  ==
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* [[RXNDQC-2]]
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* Gene: [[SJ07072]]
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* [[RXNN-404]]
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** Category: [[annotation]]
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* [[TRYPTOPHAN-AMINOTRANSFERASE-RXN]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Reaction(s) not found ==
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* Gene: [[SJ20751]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12061 RXN-12061]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1405 RXN-1405]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1406 RXN-1406]
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* Gene: [[SJ00609]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12062 RXN-12062]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-19838 RXN-19838]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7567 RXN-7567]
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* Gene: [[SJ02842]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12063 RXN-12063]
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** Category: [[annotation]]
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{{#set: taxonomic-range=tax-33090}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: common-name=indole-3-acetate biosynthesis ii}}
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* Gene: [[SJ11757]]
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{{#set: nb reaction found=5}}
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** Category: [[annotation]]
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{{#set: completion rate=0.42}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: nb total reaction=12}}
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* Gene: [[SJ02693]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Pathway(s)  ==
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* [[PWY-5890]], menaquinol-10 biosynthesis:
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44785 44785]
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{{#set: direction=left-to-right}}
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{{#set: ec-number=ec-2.1.1.163}}
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{{#set: nb gene associated=6}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 20:46, 18 December 2020

Reaction RXN-9361

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5890, menaquinol-10 biosynthesis:
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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