Difference between revisions of "FERREDOXIN--NITRITE-REDUCTASE-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13061 RXN-13061] == * direction: ** left-to-right * common-name: ** l-dopa oxidase (membrane-bo...")
(Created page with "Category:reaction == Reaction 3.1.13.1-RXN == * direction: ** left-to-right * common-name: ** ribonuclease * ec-number: ** [http://enzyme.expasy.org/EC/3.1.13.1 ec-3.1.13....")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13061 RXN-13061] ==
+
== Reaction 3.1.13.1-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** l-dopa oxidase (membrane-bound)
+
** ribonuclease
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.10.3 ec-1.10.3]
+
** [http://enzyme.expasy.org/EC/3.1.13.1 ec-3.1.13.1]
 +
* synonymous:
 +
** ribonuclease ii
 
== Reaction formula ==
 
== Reaction formula ==
−
* 2 [[L-DIHYDROXY-PHENYLALANINE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 2 [[DOPAQUINONE]][c] '''+''' 2 [[WATER]][c]
+
* 1 [[RNASE-II-DEGRADATION-SUBSTRATE-MRNA]][c] '''+''' n [[WATER]][c] '''=>''' n [[Nucleoside-Monophosphates]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ06532]]
+
* Gene: [[SJ19616]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ10614]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ06533]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ04618]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ18841]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5399]], betacyanin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5399 PWY-5399]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* UNIPROT:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34288 34288]
+
** [http://www.uniprot.org/uniprot/P30850 P30850]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00045 R00045]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=l-dopa oxidase (membrane-bound)}}
+
{{#set: common-name=ribonuclease}}
−
{{#set: ec-number=ec-1.10.3}}
+
{{#set: ec-number=ec-3.1.13.1}}
−
{{#set: nb gene associated=5}}
+
{{#set: synonymous=ribonuclease ii}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb gene associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 20:42, 18 December 2020

Reaction 3.1.13.1-RXN

  • direction:
    • left-to-right
  • common-name:
    • ribonuclease
  • ec-number:
  • synonymous:
    • ribonuclease ii

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links






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