Difference between revisions of "FGFTh"

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(Created page with "Category:reaction == Reaction RXN-12461 == * direction: ** left-to-right * common-name: ** trna (carboxymethyluridine34-5-o)-methyltransferase * ec-number: ** [http://enzy...")
(Created page with "Category:reaction == Reaction FGFTh == * direction: ** left-to-right * common-name: ** n2-formyl-n1-(5-phospho-d-ribosyl)glycinamide formyltransferase, chloroplast == Reac...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-12461 ==
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== Reaction FGFTh ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** trna (carboxymethyluridine34-5-o)-methyltransferase
+
** n2-formyl-n1-(5-phospho-d-ribosyl)glycinamide formyltransferase, chloroplast
* ec-number:
 
** [http://enzyme.expasy.org/EC/2.1.1.229 ec-2.1.1.229]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[carbo-me-ur-34-tRNA]][c] '''=>''' 1 [[5-2-me-oxy-2-oxo-et-ur-34-tRNA]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
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* 1.0 [[5-P-RIBOSYL-N-FORMYLGLYCINEAMIDE]][h] '''+''' 3.0 [[PROTON]][h] '''+''' 1.0 [[THF]][h] '''=>''' 1.0 [[5-10-METHENYL-THF]][h] '''+''' 1.0 [[5-PHOSPHO-RIBOSYL-GLYCINEAMIDE]][h] '''+''' 1.0 [[WATER]][h]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ02625]]
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* Gene: [[SJ06408]]
** Category: [[annotation]]
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** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ16612]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7888]], tRNA-uridine 2-thiolation (cytoplasmic):
 
** '''2''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-6829]], tRNA methylation (yeast):
 
** '''11''' reactions found over '''15''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=43209 43209]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=trna (carboxymethyluridine34-5-o)-methyltransferase}}
+
{{#set: common-name=n2-formyl-n1-(5-phospho-d-ribosyl)glycinamide formyltransferase, chloroplast}}
{{#set: ec-number=ec-2.1.1.229}}
+
{{#set: nb gene associated=1}}
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=0}}
{{#set: nb pathway associated=2}}
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{{#set: reconstruction category=orthology}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Latest revision as of 11:21, 18 March 2021

Reaction FGFTh

  • direction:
    • left-to-right
  • common-name:
    • n2-formyl-n1-(5-phospho-d-ribosyl)glycinamide formyltransferase, chloroplast

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links