Difference between revisions of "FMNH2"

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(Created page with "Category:gene == Gene SJ01009 == * transcription-direction: ** positive * right-end-position: ** 81048 * left-end-position: ** 71004 * centisome-position: ** 44.793236...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13398 RXN-13398] == * direction: ** left-to-right * common-name: ** chlorophyllide a oxygenase...")
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[[Category:gene]]
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[[Category:reaction]]
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== Gene SJ01009 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13398 RXN-13398] ==
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* transcription-direction:
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* direction:
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** positive
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** left-to-right
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* right-end-position:
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* common-name:
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** 81048
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** chlorophyllide a oxygenase [overall]
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* left-end-position:
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* ec-number:
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** 71004
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** [http://enzyme.expasy.org/EC/1.14.13.122 ec-1.14.13.122]
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* centisome-position:
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== Reaction formula ==
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** 44.793236   
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* 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 2 [[NADPH]][c] '''+''' 2 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CPD-7014]][c] '''+''' 2 [[NADP]][c] '''+''' 3 [[WATER]][c]
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== Organism(s) associated with this gene  ==
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== Gene(s) associated with this reaction  ==
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* [[S.japonica_carotenoid_curated]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) associated ==
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* Gene: [[SJ15075]]
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* [[2.7.10.1-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [[2.7.12.1-RXN]]
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ04336]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[PROTEIN-KINASE-RXN]]
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* Gene: [[SJ22309]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* [[RXN-14906]]
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* Gene: [[SJ22311]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: transcription-direction=positive}}
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* Gene: [[SJ00278]]
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{{#set: right-end-position=81048}}
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** Category: [[annotation]]
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{{#set: left-end-position=71004}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: centisome-position=44.793236    }}
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** Category: [[orthology]]
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: nb reaction associated=4}}
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* Gene: [[SJ17313]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ07178]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08869]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ16078]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 +
== Pathway(s)  ==
 +
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== External links  ==
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R10080 R10080]
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22139 22139]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=chlorophyllide a oxygenase [overall]}}
 +
{{#set: ec-number=ec-1.14.13.122}}
 +
{{#set: nb gene associated=9}}
 +
{{#set: nb pathway associated=0}}
 +
{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 09:28, 27 August 2019

Reaction RXN-13398

  • direction:
    • left-to-right
  • common-name:
    • chlorophyllide a oxygenase [overall]
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Property "Common-name" (as page type) with input value "chlorophyllide a oxygenase [overall" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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