Difference between revisions of "FUCOKINASE-RXN"

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(Created page with "Category:reaction == Reaction NAD-SYNTH-NH3-RXN == * direction: ** left-to-right * common-name: ** nad+ synthase * ec-number: ** [http://enzyme.expasy.org/EC/6.3.1.5 ec-6....")
(Created page with "Category:reaction == Reaction RXN-9281 == * direction: ** left-to-right * common-name: ** nonaprenyldihydroxybenzoate methyltransferase ** polyprenyldihydroxybenzoate meth...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction NAD-SYNTH-NH3-RXN ==
+
== Reaction RXN-9281 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** nad+ synthase
+
** nonaprenyldihydroxybenzoate methyltransferase
 +
** polyprenyldihydroxybenzoate methyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.3.1.5 ec-6.3.1.5]
+
** [http://enzyme.expasy.org/EC/2.1.1.114 ec-2.1.1.114]
 +
* synonymous:
 +
** 3-nonaprenyl-4,5-dihydroxybenzoate methyltransferase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[AMMONIUM]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[DEAMIDO-NAD]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-9896]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-9898]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ20196]]
+
* Gene: [[SJ13007]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PYRIDNUCSYN-PWY]], NAD de novo biosynthesis I (from aspartate):
+
* [[PWY-5871]], ubiquinol-9 biosynthesis (eukaryotic):
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21189 21189]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44489 44489]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00189 R00189]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P08164 P08164]
 
−
** [http://www.uniprot.org/uniprot/P18843 P18843]
 
−
** [http://www.uniprot.org/uniprot/Q03638 Q03638]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=nad+ synthase}}
+
{{#set: common-name=polyprenyldihydroxybenzoate methyltransferase|nonaprenyldihydroxybenzoate methyltransferase}}
−
{{#set: ec-number=ec-6.3.1.5}}
+
{{#set: ec-number=ec-2.1.1.114}}
 +
{{#set: synonymous=3-nonaprenyl-4,5-dihydroxybenzoate methyltransferase}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 11:20, 15 January 2021

Reaction RXN-9281

  • direction:
    • left-to-right
  • common-name:
    • nonaprenyldihydroxybenzoate methyltransferase
    • polyprenyldihydroxybenzoate methyltransferase
  • ec-number:
  • synonymous:
    • 3-nonaprenyl-4,5-dihydroxybenzoate methyltransferase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5871, ubiquinol-9 biosynthesis (eukaryotic):
    • 3 reactions found over 8 reactions in the full pathway

Reconstruction information

External links






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