Difference between revisions of "FUMARATE-REDUCTASE-NADH-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction 1.8.1.4-RXN == * direction: ** left-to-right * common-name: ** dihydrolipoamide dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1....")
(Created page with "Category:reaction == Reaction PALMITOYL-COA-HYDROLASE-RXN == * direction: ** left-to-right * common-name: ** palmitoyl-coa hydrolase * ec-number: ** [http://enzyme.expasy....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 1.8.1.4-RXN ==
+
== Reaction PALMITOYL-COA-HYDROLASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** dihydrolipoamide dehydrogenase
+
** palmitoyl-coa hydrolase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.8.1.4 ec-1.8.1.4]
+
** [http://enzyme.expasy.org/EC/3.1.2.2 ec-3.1.2.2]
−
* synonymous:
 
−
** diaphorase
 
−
** e3 component of α-ketoacid dehydrogenase complexes
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Dihydro-Lipoyl-Proteins]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[Lipoyl-Protein-N6-lipoyllysine]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[PALMITYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[PALMITATE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10661]]
+
* Gene: [[SJ09703]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ06474]]
+
* Gene: [[SJ18316]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ13629]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ03718]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-1121]], suberin monomers biosynthesis:
 +
** '''9''' reactions found over '''20''' reactions in the full pathway
 +
* [[PWY-6733]], sporopollenin precursors biosynthesis:
 +
** '''8''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-321]], cutin biosynthesis:
 +
** '''3''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY-5994]], palmitate biosynthesis (type I fatty acid synthase):
 +
** '''31''' reactions found over '''31''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR99131
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16645 16645]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01698 R01698]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01274 R01274]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P52992 P52992]
+
** [http://www.uniprot.org/uniprot/Q64559 Q64559]
−
** [http://www.uniprot.org/uniprot/O00087 O00087]
+
** [http://www.uniprot.org/uniprot/O14734 O14734]
−
** [http://www.uniprot.org/uniprot/O17953 O17953]
 
−
** [http://www.uniprot.org/uniprot/O50311 O50311]
 
−
** [http://www.uniprot.org/uniprot/Q41219 Q41219]
 
−
** [http://www.uniprot.org/uniprot/O81413 O81413]
 
−
** [http://www.uniprot.org/uniprot/P75393 P75393]
 
−
** [http://www.uniprot.org/uniprot/Q9I1M1 Q9I1M1]
 
−
** [http://www.uniprot.org/uniprot/Q7M0Q1 Q7M0Q1]
 
−
** [http://www.uniprot.org/uniprot/Q9JZ09 Q9JZ09]
 
−
** [http://www.uniprot.org/uniprot/Q04933 Q04933]
 
−
** [http://www.uniprot.org/uniprot/P31023 P31023]
 
−
** [http://www.uniprot.org/uniprot/P0A0E8 P0A0E8]
 
−
** [http://www.uniprot.org/uniprot/P31046 P31046]
 
−
** [http://www.uniprot.org/uniprot/P11959 P11959]
 
−
** [http://www.uniprot.org/uniprot/Q48419 Q48419]
 
−
** [http://www.uniprot.org/uniprot/P49819 P49819]
 
−
** [http://www.uniprot.org/uniprot/P47513 P47513]
 
−
** [http://www.uniprot.org/uniprot/Q59299 Q59299]
 
−
** [http://www.uniprot.org/uniprot/P43784 P43784]
 
−
** [http://www.uniprot.org/uniprot/Q9JU06 Q9JU06]
 
−
** [http://www.uniprot.org/uniprot/Q60154 Q60154]
 
−
** [http://www.uniprot.org/uniprot/Q9RRG6 Q9RRG6]
 
−
** [http://www.uniprot.org/uniprot/P21880 P21880]
 
−
** [http://www.uniprot.org/uniprot/P09063 P09063]
 
−
** [http://www.uniprot.org/uniprot/P09623 P09623]
 
−
** [http://www.uniprot.org/uniprot/P09622 P09622]
 
−
** [http://www.uniprot.org/uniprot/P0A9P0 P0A9P0]
 
−
** [http://www.uniprot.org/uniprot/P18925 P18925]
 
−
** [http://www.uniprot.org/uniprot/Q9JZP5 Q9JZP5]
 
−
** [http://www.uniprot.org/uniprot/Q58053 Q58053]
 
−
** [http://www.uniprot.org/uniprot/Q59099 Q59099]
 
−
** [http://www.uniprot.org/uniprot/P35484 P35484]
 
−
** [http://www.uniprot.org/uniprot/Q7M0Y3 Q7M0Y3]
 
−
** [http://www.uniprot.org/uniprot/Q9JUT1 Q9JUT1]
 
−
** [http://www.uniprot.org/uniprot/Q9ZD83 Q9ZD83]
 
−
** [http://www.uniprot.org/uniprot/Q7M0Y4 Q7M0Y4]
 
−
** [http://www.uniprot.org/uniprot/Q9JUT5 Q9JUT5]
 
−
** [http://www.uniprot.org/uniprot/Q04829 Q04829]
 
−
** [http://www.uniprot.org/uniprot/P31052 P31052]
 
−
** [http://www.uniprot.org/uniprot/Q7M0Y5 Q7M0Y5]
 
−
** [http://www.uniprot.org/uniprot/P09624 P09624]
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15045 15045]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=dihydrolipoamide dehydrogenase}}
+
{{#set: common-name=palmitoyl-coa hydrolase}}
−
{{#set: ec-number=ec-1.8.1.4}}
+
{{#set: ec-number=ec-3.1.2.2}}
−
{{#set: synonymous=diaphorase|e3 component of &alpha;-ketoacid dehydrogenase complexes}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb pathway associated=4}}
−
{{#set: nb pathway associated=0}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}

Revision as of 08:32, 15 March 2021

Reaction PALMITOYL-COA-HYDROLASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • palmitoyl-coa hydrolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-1121, suberin monomers biosynthesis:
    • 9 reactions found over 20 reactions in the full pathway
  • PWY-6733, sporopollenin precursors biosynthesis:
    • 8 reactions found over 18 reactions in the full pathway
  • PWY-321, cutin biosynthesis:
    • 3 reactions found over 16 reactions in the full pathway
  • PWY-5994, palmitate biosynthesis (type I fatty acid synthase):
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=FUMARATE-REDUCTASE-NADH-RXN&oldid=127074"