Difference between revisions of "GABATRANSAM-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6703 PWY-6703] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2] *...")
(Created page with "Category:reaction == Reaction GABATRANSAM-RXN == * direction: ** reversible * common-name: ** 4-aminobutyrate transaminase * ec-number: ** [http://enzyme.expasy.org/EC/2.6...")
 
(8 intermediate revisions by 4 users not shown)
Line 1: Line 1:
−
[[Category:pathway]]
+
[[Category:reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6703 PWY-6703] ==
+
== Reaction GABATRANSAM-RXN ==
−
* taxonomic-range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
+
** reversible
 
* common-name:
 
* common-name:
−
** preq0 biosynthesis
+
** 4-aminobutyrate transaminase
−
== Reaction(s) found ==
+
* ec-number:
−
* [[GTP-CYCLOHYDRO-I-RXN]]
+
** [http://enzyme.expasy.org/EC/2.6.1.19 ec-2.6.1.19]
−
== Reaction(s) not found ==
+
== Reaction formula ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12093 RXN-12093]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[4-AMINO-BUTYRATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[SUCC-S-ALD]][c]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6575 RXN0-6575]
+
== Gene(s) associated with this reaction  ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5507 RXN0-5507]
+
* Gene: [[SJ07892]]
−
{{#set: taxonomic-range=tax-2}}
+
** Category: [[annotation]]
−
{{#set: common-name=preq0 biosynthesis}}
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
{{#set: nb reaction found=1}}
+
== Pathway(s) ==
−
{{#set: completion rate=0.25}}
+
* [[GLUDEG-I-PWY]], GABA shunt:
−
{{#set: nb total reaction=4}}
+
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6536]], 4-aminobutanoate degradation III:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6537]], 4-aminobutanoate degradation II:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5022]], 4-aminobutanoate degradation V:
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6535]], 4-aminobutanoate degradation I:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-4321]], L-glutamate degradation IV:
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[P181-PWY]], nicotine degradation I (pyridine pathway):
 +
** '''2''' reactions found over '''17''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== External links  ==
 +
* METANETX-RXN : MNXR95186
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23355 23355]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01648 R01648]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P22256 P22256]
 +
** [http://www.uniprot.org/uniprot/P50457 P50457]
 +
** [http://www.uniprot.org/uniprot/Q9UZ71 Q9UZ71]
 +
** [http://www.uniprot.org/uniprot/P50554 P50554]
 +
** [http://www.uniprot.org/uniprot/P80404 P80404]
 +
** [http://www.uniprot.org/uniprot/P14010 P14010]
 +
** [http://www.uniprot.org/uniprot/P17649 P17649]
 +
** [http://www.uniprot.org/uniprot/P40829 P40829]
 +
** [http://www.uniprot.org/uniprot/O13837 O13837]
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=4-aminobutyrate transaminase}}
 +
{{#set: ec-number=ec-2.6.1.19}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=7}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction GABATRANSAM-RXN

  • direction:
    • reversible
  • common-name:
    • 4-aminobutyrate transaminase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • GLUDEG-I-PWY, GABA shunt:
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6536, 4-aminobutanoate degradation III:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6537, 4-aminobutanoate degradation II:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5022, 4-aminobutanoate degradation V:
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6535, 4-aminobutanoate degradation I:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-4321, L-glutamate degradation IV:
    • 3 reactions found over 5 reactions in the full pathway
  • P181-PWY, nicotine degradation I (pyridine pathway):
    • 2 reactions found over 17 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=GABATRANSAM-RXN&oldid=142240"