Difference between revisions of "GALACTOSIDE-3-FUCOSYLTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPDEPHOS-RXN PEPDEPHOS-RXN] == * direction: ** left-to-right * common-name: ** pyruvate kinase * e...")
(Created page with "Category:reaction == Reaction RXN-15587 == * direction: ** reversible * common-name: ** indoxyl sulfotransferase ** aryl sulfotransferase * ec-number: ** [http://enzyme.ex...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPDEPHOS-RXN PEPDEPHOS-RXN] ==
+
== Reaction RXN-15587 ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** pyruvate kinase
+
** indoxyl sulfotransferase
 +
** aryl sulfotransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.40 ec-2.7.1.40]
+
** [http://enzyme.expasy.org/EC/2.8.2.1 ec-2.8.2.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ADP]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[ATP]][c] '''+''' 1 [[PYRUVATE]][c]
+
* 1 [[INDOXYL]][c] '''+''' 1 [[PAPS]][c] '''<=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[CPD-16817]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* Gene: [[SJ17585]]
+
* Gene: [[SJ00192]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ01900]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ18193]]
+
* Gene: [[SJ07550]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ18192]]
+
* Gene: [[SJ19194]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06276]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ13451]]
+
* Gene: [[SJ05841]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ10094]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
</div>
 
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
 
−
** '''16''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY-5484]], glycolysis II (from fructose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5484 PWY-5484]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[P124-PWY]], Bifidobacterium shunt: [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY]
 
−
** '''12''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-1042]], glycolysis IV (plant cytosol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1042 PWY-1042]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[P341-PWY]], glycolysis V (Pyrococcus): [http://metacyc.org/META/NEW-IMAGE?object=P341-PWY P341-PWY]
 
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
−
* [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS GLYCOLYSIS]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose): [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-7003]], glycerol degradation to butanol: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7003 PWY-7003]
 
−
** '''8''' reactions found over '''6''' reactions in the full pathway
 
−
* [[FERMENTATION-PWY]], mixed acid fermentation: [http://metacyc.org/META/NEW-IMAGE?object=FERMENTATION-PWY FERMENTATION-PWY]
 
−
** '''11''' reactions found over '''16''' reactions in the full pathway
 
−
* [[PWY-6886]], 1-butanol autotrophic biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6886 PWY-6886]
 
−
** '''8''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7218]], photosynthetic 3-hydroxybutanoate biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7218 PWY-7218]
 
−
** '''7''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5723]], Rubisco shunt: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5723 PWY-5723]
 
−
** '''10''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-2221]], Entner-Doudoroff pathway III (semi-phosphorylative): [http://metacyc.org/META/NEW-IMAGE?object=PWY-2221 PWY-2221]
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-7383]], anaerobic energy metabolism (invertebrates, cytosol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7383 PWY-7383]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6901]], superpathway of glucose and xylose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6901 PWY-6901]
 
−
** '''10''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6142 PWY-6142]
 
−
** '''10''' reactions found over '''13''' reactions in the full pathway
 
−
* [[NPGLUCAT-PWY]], Entner-Doudoroff pathway II (non-phosphorylative): [http://metacyc.org/META/NEW-IMAGE?object=NPGLUCAT-PWY NPGLUCAT-PWY]
 
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
−
</div>
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
{{#set: direction=reversible}}
−
* RHEA:
+
{{#set: common-name=aryl sulfotransferase|indoxyl sulfotransferase}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18157 18157]
+
{{#set: ec-number=ec-2.8.2.1}}
−
* LIGAND-RXN:
+
{{#set: nb gene associated=7}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00200 R00200]
+
{{#set: nb pathway associated=0}}
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q7M034 Q7M034]
 
−
** [http://www.uniprot.org/uniprot/P11979 P11979]
 
−
** [http://www.uniprot.org/uniprot/P11980 P11980]
 
−
** [http://www.uniprot.org/uniprot/Q07637 Q07637]
 
−
** [http://www.uniprot.org/uniprot/P34038 P34038]
 
−
** [http://www.uniprot.org/uniprot/P43924 P43924]
 
−
** [http://www.uniprot.org/uniprot/Q57572 Q57572]
 
−
** [http://www.uniprot.org/uniprot/P0AD61 P0AD61]
 
−
** [http://www.uniprot.org/uniprot/P19680 P19680]
 
−
** [http://www.uniprot.org/uniprot/Q9PIB0 Q9PIB0]
 
−
** [http://www.uniprot.org/uniprot/P80885 P80885]
 
−
** [http://www.uniprot.org/uniprot/Q9UYU6 Q9UYU6]
 
−
** [http://www.uniprot.org/uniprot/Q9JWX8 Q9JWX8]
 
−
** [http://www.uniprot.org/uniprot/P47458 P47458]
 
−
** [http://www.uniprot.org/uniprot/Q46078 Q46078]
 
−
** [http://www.uniprot.org/uniprot/P30614 P30614]
 
−
** [http://www.uniprot.org/uniprot/P22200 P22200]
 
−
** [http://www.uniprot.org/uniprot/Q27788 Q27788]
 
−
** [http://www.uniprot.org/uniprot/P51182 P51182]
 
−
** [http://www.uniprot.org/uniprot/P51181 P51181]
 
−
** [http://www.uniprot.org/uniprot/P31865 P31865]
 
−
** [http://www.uniprot.org/uniprot/P00549 P00549]
 
−
** [http://www.uniprot.org/uniprot/P00548 P00548]
 
−
** [http://www.uniprot.org/uniprot/P30613 P30613]
 
−
** [http://www.uniprot.org/uniprot/O75758 O75758]
 
−
** [http://www.uniprot.org/uniprot/P12928 P12928]
 
−
** [http://www.uniprot.org/uniprot/O30853 O30853]
 
−
** [http://www.uniprot.org/uniprot/P30615 P30615]
 
−
** [http://www.uniprot.org/uniprot/P30616 P30616]
 
−
** [http://www.uniprot.org/uniprot/Q02499 Q02499]
 
−
** [http://www.uniprot.org/uniprot/P22360 P22360]
 
−
** [http://www.uniprot.org/uniprot/P21599 P21599]
 
−
** [http://www.uniprot.org/uniprot/P14618 P14618]
 
−
** [http://www.uniprot.org/uniprot/Q42954 Q42954]
 
−
** [http://www.uniprot.org/uniprot/Q40545 Q40545]
 
−
** [http://www.uniprot.org/uniprot/P52480 P52480]
 
−
** [http://www.uniprot.org/uniprot/P52489 P52489]
 
−
** [http://www.uniprot.org/uniprot/P78031 P78031]
 
−
** [http://www.uniprot.org/uniprot/Q55863 Q55863]
 
−
** [http://www.uniprot.org/uniprot/P73534 P73534]
 
−
** [http://www.uniprot.org/uniprot/O65595 O65595]
 
−
** [http://www.uniprot.org/uniprot/Q42806 Q42806]
 
−
** [http://www.uniprot.org/uniprot/Q43117 Q43117]
 
−
** [http://www.uniprot.org/uniprot/Q10208 Q10208]
 
−
</div>
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=pyruvate kinase}}
 
−
{{#set: ec-number=ec-2.7.1.40}}
 
−
{{#set: nb gene associated=4}}
 
−
{{#set: nb pathway associated=17}}
 
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:39, 18 December 2020

Reaction RXN-15587

  • direction:
    • reversible
  • common-name:
    • indoxyl sulfotransferase
    • aryl sulfotransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=GALACTOSIDE-3-FUCOSYLTRANSFERASE-RXN&oldid=49069"