Difference between revisions of "GBDP"

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(Created page with "Category:reaction == Reaction CYCLOEUCALENOL-CYCLOISOMERASE-RXN == * direction: ** left-to-right * common-name: ** cycloeucalenol cycloisomerase * ec-number: ** [http://en...")
(Created page with "Category:reaction == Reaction GBDP == * direction: ** reversible * common-name: ** guanosine-3',5'-bis(diphosphate) 3'-diphosphatase == Reaction formula == * 1.0 GUANOSI...")
 
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction CYCLOEUCALENOL-CYCLOISOMERASE-RXN ==
+
== Reaction GBDP ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** cycloeucalenol cycloisomerase
+
** guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/5.5.1.9 ec-5.5.1.9]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CYCLOEUCALENOL]][c] '''=>''' 1 [[OBTUSIFOLIOL]][c]
+
* 1.0 [[GUANOSINE-5DP-3DP]][c] '''+''' 1.0 [[WATER]][c] '''<=>''' 1.0 [[GDP]][c] '''+''' 1.0 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09463]]
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* Gene: [[SJ10100]]
−
** Category: [[annotation]]
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** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ13961]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7155]], 7-dehydroporiferasterol biosynthesis:
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-2541]], phytosterol biosynthesis (plants):
 
−
** '''11''' reactions found over '''35''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR96959
+
{{#set: direction=reversible}}
−
* RHEA:
+
{{#set: common-name=guanosine-3',5'-bis(diphosphate) 3'-diphosphatase}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22801 22801]
+
{{#set: nb gene associated=2}}
−
* LIGAND-RXN:
+
{{#set: nb pathway associated=0}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03775 R03775]
+
{{#set: reconstruction category=orthology}}
−
{{#set: direction=left-to-right}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: common-name=cycloeucalenol cycloisomerase}}
 
−
{{#set: ec-number=ec-5.5.1.9}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=2}}
 
−
{{#set: reconstruction category=orthology|annotation}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Latest revision as of 11:23, 18 March 2021

Reaction GBDP

  • direction:
    • reversible
  • common-name:
    • guanosine-3',5'-bis(diphosphate) 3'-diphosphatase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=GBDP&oldid=142090"