Difference between revisions of "GCVT-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3821 PWY-3821] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-3193 tax-31...")
 
(Created page with "Category:reaction == Reaction GCVT-RXN == * direction: ** reversible * common-name: ** aminomethyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.1.2.10 ec-2.1....")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3821 PWY-3821] ==
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== Reaction GCVT-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-3193 tax-3193]
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** reversible
 
* common-name:
 
* common-name:
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** d-galactose detoxification
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** aminomethyltransferase
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== Reaction(s) found ==
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* ec-number:
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* [[GALACTOKIN-RXN]]
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** [http://enzyme.expasy.org/EC/2.1.2.10 ec-2.1.2.10]
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* [[UDPGLUCEPIM-RXN]]
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== Reaction formula ==
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* [[UTPHEXPURIDYLYLTRANS-RXN]]
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* 1 [[AMINOMETHYLDIHYDROLIPOYL-GCVH]][c] '''+''' 1 [[THF-GLU-N]][c] '''<=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[DIHYDROLIPOYL-GCVH]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c]
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== Reaction(s) not found ==
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== Gene(s) associated with this reaction  ==
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All reactions of this pathways are in present
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* Gene: [[SJ16345]]
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{{#set: taxonomic-range=tax-3193}}
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** Category: [[orthology]]
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{{#set: common-name=d-galactose detoxification}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: nb reaction found=3}}
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* Gene: [[SJ19914]]
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{{#set: completion rate=1.0}}
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** Category: [[orthology]]
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{{#set: nb total reaction=3}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ08557]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Pathway(s) ==
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* [[GLYCLEAV-PWY]], glycine cleavage:
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* METANETX-RXN : MNXR115909
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R04125 R04125]
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16945 16945]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P25285 P25285]
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** [http://www.uniprot.org/uniprot/P28337 P28337]
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** [http://www.uniprot.org/uniprot/P27248 P27248]
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** [http://www.uniprot.org/uniprot/Q9UZP8 Q9UZP8]
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** [http://www.uniprot.org/uniprot/Q9JVP2 Q9JVP2]
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** [http://www.uniprot.org/uniprot/P48728 P48728]
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** [http://www.uniprot.org/uniprot/P49364 P49364]
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** [http://www.uniprot.org/uniprot/P49095 P49095]
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** [http://www.uniprot.org/uniprot/P49363 P49363]
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** [http://www.uniprot.org/uniprot/P54260 P54260]
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** [http://www.uniprot.org/uniprot/P49361 P49361]
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** [http://www.uniprot.org/uniprot/P49362 P49362]
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** [http://www.uniprot.org/uniprot/O49954 O49954]
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** [http://www.uniprot.org/uniprot/P93256 P93256]
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** [http://www.uniprot.org/uniprot/O32955 O32955]
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</div>
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{{#set: direction=reversible}}
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{{#set: common-name=aminomethyltransferase}}
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{{#set: ec-number=ec-2.1.2.10}}
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{{#set: nb gene associated=3}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction GCVT-RXN

  • direction:
    • reversible
  • common-name:
    • aminomethyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • GLYCLEAV-PWY, glycine cleavage:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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