Difference between revisions of "GCVT-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5196 PWY-5196] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-224756 tax-...")
(Created page with "Category:reaction == Reaction GSAAMINOTRANS-RXN == * direction: ** left-to-right * common-name: ** glutamate-1-semialdehyde aminotransferase * ec-number: ** [http://enzyme...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5196 PWY-5196] ==
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== Reaction GSAAMINOTRANS-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-224756 tax-224756]
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** left-to-right
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-183939 tax-183939]
 
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-183925 tax-183925]
 
 
* common-name:
 
* common-name:
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** factor 430 biosynthesis
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** glutamate-1-semialdehyde aminotransferase
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== Reaction(s) found ==
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* ec-number:
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* [[DIMETHUROPORDEHYDROG-RXN]]
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** [http://enzyme.expasy.org/EC/5.4.3.8 ec-5.4.3.8]
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* [[RXN-8675]]
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== Reaction formula ==
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* [[UROPORIIIMETHYLTRANSA-RXN]]
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* 1 [[GLUTAMATE-1-SEMIALDEHYDE]][c] '''=>''' 1 [[5-AMINO-LEVULINATE]][c]
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== Reaction(s) not found ==
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8063 RXN-8063]
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* Gene: [[SJ13978]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8061 RXN-8061]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8060 RXN-8060]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8059 RXN-8059]
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** Category: [[orthology]]
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{{#set: taxonomic-range=tax-224756|tax-183925|tax-183939}}
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: common-name=factor 430 biosynthesis}}
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: nb reaction found=3}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: completion rate=0.43}}
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== Pathway(s) ==
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{{#set: nb total reaction=7}}
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* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate):
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14265 14265]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R02272 R02272]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P18492 P18492]
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** [http://www.uniprot.org/uniprot/P21267 P21267]
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** [http://www.uniprot.org/uniprot/Q06741 Q06741]
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** [http://www.uniprot.org/uniprot/Q06774 Q06774]
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** [http://www.uniprot.org/uniprot/P23893 P23893]
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** [http://www.uniprot.org/uniprot/O26330 O26330]
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** [http://www.uniprot.org/uniprot/P30949 P30949]
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** [http://www.uniprot.org/uniprot/Q9PP70 Q9PP70]
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** [http://www.uniprot.org/uniprot/Q9JW10 Q9JW10]
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** [http://www.uniprot.org/uniprot/O29027 O29027]
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** [http://www.uniprot.org/uniprot/P45621 P45621]
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** [http://www.uniprot.org/uniprot/P24630 P24630]
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** [http://www.uniprot.org/uniprot/P31593 P31593]
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** [http://www.uniprot.org/uniprot/Q39566 Q39566]
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** [http://www.uniprot.org/uniprot/P48247 P48247]
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** [http://www.uniprot.org/uniprot/P46716 P46716]
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** [http://www.uniprot.org/uniprot/Q40147 Q40147]
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** [http://www.uniprot.org/uniprot/O74061 O74061]
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</div>
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{{#set: direction=left-to-right}}
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{{#set: common-name=glutamate-1-semialdehyde aminotransferase}}
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{{#set: ec-number=ec-5.4.3.8}}
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{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana}}

Revision as of 20:44, 18 December 2020

Reaction GSAAMINOTRANS-RXN

  • direction:
    • left-to-right
  • common-name:
    • glutamate-1-semialdehyde aminotransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5188, tetrapyrrole biosynthesis I (from glutamate):
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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