Difference between revisions of "GDP"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TROPINE-DEHYDROGENASE-RXN TROPINE-DEHYDROGENASE-RXN] == * direction: ** reversible * common-name: *...")
(Created page with "Category:metabolite == Metabolite GDP == * common-name: ** gdp * smiles: ** c(op(=o)([o-])op(=o)([o-])[o-])c1(oc(c(o)c(o)1)n3(c=nc2(c(=o)nc(n)=nc=23))) * inchi-key: ** qgw...")
 
(8 intermediate revisions by 4 users not shown)
Line 1: Line 1:
[[Category:reaction]]
+
[[Category:metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TROPINE-DEHYDROGENASE-RXN TROPINE-DEHYDROGENASE-RXN] ==
+
== Metabolite GDP ==
* direction:
 
** reversible
 
 
* common-name:
 
* common-name:
** tropinone reductase
+
** gdp
* ec-number:
+
* smiles:
** [http://enzyme.expasy.org/EC/1.1.1.206 ec-1.1.1.206]
+
** c(op(=o)([o-])op(=o)([o-])[o-])c1(oc(c(o)c(o)1)n3(c=nc2(c(=o)nc(n)=nc=23)))
== Reaction formula ==
+
* inchi-key:
* 1 [[NADP]][c] '''+''' 1 [[TROPINE]][c] '''<=>''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[TROPINONE]][c]
+
** qgwndrxfnxrzmb-uuokfmhzsa-k
== Gene(s) associated with this reaction  ==
+
* molecular-weight:
* Gene: [[SJ18483]]
+
** 440.179
** Category: [[annotation]]
+
== Reaction(s) known to consume the compound ==
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[2.4.1.221-RXN]]
== Pathway(s) ==
+
* [[ATGD]]
* [[PWY-7341]], superpathway of hyoscyamine and scopolamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7341 PWY-7341]
+
* [[DGOTO]]
** '''2''' reactions found over '''8''' reactions in the full pathway
+
* [[GBDP]]
* [[PWY-5317]], hyoscyamine and scopolamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5317 PWY-5317]
+
* [[GDPKIN-RXN]]
** '''1''' reactions found over '''8''' reactions in the full pathway
+
* [[GDPPYPHOSKIN-RXN]]
== Reconstruction information  ==
+
* [[GDPREDUCT-RXN]]
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[GTPOP]]
== External links  ==
+
* [[GUANOSINE-DIPHOSPHATASE-RXN]]
* RHEA:
+
* [[MANNPGUANYLTRANGDP-RXN]]
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18360 18360]
+
* [[RXN-12486]]
* LIGAND-RXN:
+
* [[RXN-14117]]
** [http://www.genome.jp/dbget-bin/www_bget?R02832 R02832]
+
* [[RXN-15268]]
{{#set: direction=reversible}}
+
* [[RXN0-748]]
{{#set: common-name=tropinone reductase}}
+
* [[SUCCINATE--COA-LIGASE-GDP-FORMING-RXN]]
{{#set: ec-number=ec-1.1.1.206}}
+
* [[SUCL_LPAREN_gdp_RPAREN_m]]
{{#set: nb gene associated=1}}
+
== Reaction(s) known to produce the compound ==
{{#set: nb pathway associated=2}}
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
{{#set: reconstruction category=annotation}}
+
* [[2.4.1.142-RXN]]
{{#set: reconstruction tool=pathwaytools}}
+
* [[2.4.1.221-RXN]]
{{#set: reconstruction comment=n.a}}
+
* [[2.4.1.68-RXN]]
{{#set: reconstruction source=saccharina_japonica_genome}}
+
* [[2.4.1.83-RXN]]
 +
* [[ADENYLOSUCCINATE-SYNTHASE-RXN]]
 +
* [[AGPT]]
 +
* [[ALGINATE-SYNTHASE-RXN]]
 +
* [[FE2GTPabc]]
 +
* [[GALACTOSIDE-2-L-FUCOSYLTRANSFERASE-RXN]]
 +
* [[GALACTOSIDE-3-FUCOSYLTRANSFERASE-RXN]]
 +
* [[GBDP]]
 +
* [[GTCY]]
 +
* [[GTUP]]
 +
* [[GUANYL-KIN-RXN]]
 +
* [[MANNPGUANYLTRANGDP-RXN]]
 +
* [[PPGPPSYN-RXN]]
 +
* [[RXN-12486]]
 +
* [[RXN-15268]]
 +
* [[RXN-16602]]
 +
* [[RXN-5462]]
 +
* [[RXN-5463]]
 +
* [[RXN-5464]]
 +
* [[RXN-8988]]
 +
* [[RXN-9463]]
 +
* [[RXN0-5462]]
 +
* [[RXNQT-4141]]
 +
* [[SUCCINATE--COA-LIGASE-GDP-FORMING-RXN]]
 +
* [[SUCL_LPAREN_gdp_RPAREN_m]]
 +
* [[URKI-RXN]]
 +
</div>
 +
== Reaction(s) of unknown directionality ==
 +
{{#set: common-name=gdp}}
 +
{{#set: inchi-key=inchikey=qgwndrxfnxrzmb-uuokfmhzsa-k}}
 +
{{#set: molecular-weight=440.179}}

Latest revision as of 11:15, 18 March 2021