Difference between revisions of "GDP"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIOL-OXIDASE-RXN THIOL-OXIDASE-RXN] == * direction: ** left-to-right * common-name: ** thiol oxida...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TROPINE-DEHYDROGENASE-RXN TROPINE-DEHYDROGENASE-RXN] == * direction: ** reversible * common-name: *...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIOL-OXIDASE-RXN THIOL-OXIDASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TROPINE-DEHYDROGENASE-RXN TROPINE-DEHYDROGENASE-RXN] ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** thiol oxidase
+
** tropinone reductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.8.3.2 ec-1.8.3.2]
+
** [http://enzyme.expasy.org/EC/1.1.1.206 ec-1.1.1.206]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[Sulfhydryls]][c] '''=>''' 1 [[CPD-8529]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
+
* 1 [[NADP]][c] '''+''' 1 [[TROPINE]][c] '''<=>''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[TROPINONE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ11283]]
+
* Gene: [[SJ18483]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ04031]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ17411]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7341]], superpathway of hyoscyamine and scopolamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7341 PWY-7341]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5317]], hyoscyamine and scopolamine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5317 PWY-5317]
 +
** '''1''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17360 17360]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18360 18360]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00057 R00057]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02832 R02832]
−
{{#set: direction=left-to-right}}
+
{{#set: direction=reversible}}
−
{{#set: common-name=thiol oxidase}}
+
{{#set: common-name=tropinone reductase}}
−
{{#set: ec-number=ec-1.8.3.2}}
+
{{#set: ec-number=ec-1.1.1.206}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 14:24, 26 August 2019

Reaction TROPINE-DEHYDROGENASE-RXN

  • direction:
    • reversible
  • common-name:
    • tropinone reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7341, superpathway of hyoscyamine and scopolamine biosynthesis: PWY-7341
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5317, hyoscyamine and scopolamine biosynthesis: PWY-5317
    • 1 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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