Difference between revisions of "GDP-MANNOSE-6-DEHYDROGENASE-RXN"

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(Created page with "Category:reaction == Reaction RXN-12587 == * direction: ** reversible * common-name: ** s-sulfanyl-[cysteine desulfurase]:[acceptor protein cysteine] sulfurtransferase * e...")
(Created page with "Category:reaction == Reaction PYRIDOXINE-4-OXIDASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.1.3.12 ec-1.1.3.12] == Reaction form...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-12587 ==
+
== Reaction PYRIDOXINE-4-OXIDASE-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* common-name:
 
−
** s-sulfanyl-[cysteine desulfurase]:[acceptor protein cysteine] sulfurtransferase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.8.1.7 ec-2.8.1.7]
+
** [http://enzyme.expasy.org/EC/1.1.3.12 ec-1.1.3.12]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-Cysteine-Desulfurase-persulfide]][c] '''+''' 1 [[Unsulfurated-Sulfur-Acceptors]][c] '''<=>''' 1 [[Cysteine-Desulfurase-L-cysteine]][c] '''+''' 1 [[Sulfurated-Sulfur-Acceptors]][c]
+
* 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PYRIDOXINE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PYRIDOXAL]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ03655]]
−
* Gene: [[SJ17324]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ19133]]
+
* Gene: [[SJ08123]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ13485]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ04060]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ09474]]
+
* Gene: [[SJ18666]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ03223]]
+
* Gene: [[SJ01932]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5499]], vitamin B6 degradation:
 +
** '''1''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR103363
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15036 15036]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R11529 R11529]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01711 R01711]
−
* RHEA:
+
{{#set: direction=left-to-right}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=43891 43891]
+
{{#set: ec-number=ec-1.1.3.12}}
−
{{#set: direction=reversible}}
+
{{#set: nb gene associated=4}}
−
{{#set: common-name=s-sulfanyl-[cysteine desulfurase]:[acceptor protein cysteine] sulfurtransferase}}
+
{{#set: nb pathway associated=1}}
−
{{#set: ec-number=ec-2.8.1.7}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: nb gene associated=6}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: nb pathway associated=0}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 08:40, 15 March 2021

Reaction PYRIDOXINE-4-OXIDASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5499, vitamin B6 degradation:
    • 1 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR103363
  • RHEA:
  • LIGAND-RXN:





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