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| − | [[Category:reaction]] | + | [[Category:pathway]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARACHIDONATE-5-LIPOXYGENASE-RXN ARACHIDONATE-5-LIPOXYGENASE-RXN] == | + | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY] == |
| − | * direction: | + | * taxonomic-range: |
| − | ** left-to-right | + | ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-33090] |
| | + | ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2] |
| | * common-name: | | * common-name: |
| − | ** arachidonate 5-lipoxygenase | + | ** flavin biosynthesis i (bacteria and plants) |
| − | * synonymous:
| + | == Reaction(s) found == |
| − | ** c-5-lipoxygenase
| + | * [[DIOHBUTANONEPSYN-RXN]] |
| − | ** leukotriene a4 synthase
| + | * [[FADSYN-RXN]] |
| − | ** arachidonic acid 5-lipoxygenase
| + | * [[GTP-CYCLOHYDRO-II-RXN]] |
| − | ** leukotriene-a4 synthase
| + | * [[LUMAZINESYN-RXN]] |
| − | ** arachidonic 5-lipoxygenase
| + | * [[RIBOFLAVIN-SYN-RXN]] |
| − | ** δ5-lipoxygenase
| + | * [[RIBOFLAVINKIN-RXN]] |
| − | ** 5δ-lipoxygenase
| + | * [[RIBOFLAVINSYNDEAM-RXN]] |
| − | ** lta synthase
| + | * [[RIBOFLAVINSYNREDUC-RXN]] |
| − | == Reaction formula == | + | == Reaction(s) not found == |
| − | * 1 [[ARACHIDONIC_ACID]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[6E8Z11Z14Z-5S-5-HYDROPEROXYCOSA-6]][c]
| + | * [http://metacyc.org/META/NEW-IMAGE?object=RIBOPHOSPHAT-RXN RIBOPHOSPHAT-RXN] |
| − | == Gene(s) associated with this reaction ==
| + | {{#set: taxonomic-range=tax-2|tax-33090}} |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| + | {{#set: common-name=flavin biosynthesis i (bacteria and plants)}} |
| − | * Gene: [[SJ12567]] | + | {{#set: nb reaction found=8}} |
| − | ** Category: [[annotation]] | + | {{#set: completion rate=0.89}} |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| + | {{#set: nb total reaction=9}} |
| − | * Gene: [[SJ21862]]
| |
| − | ** Category: [[annotation]] | |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
| |
| − | * Gene: [[SJ08291]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[SJ16634]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[SJ16633]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | |
| − | * Gene: [[SJ05859]]
| |
| − | ** Category: [[annotation]] | |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[SJ16632]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[SJ03316]]
| |
| − | ** Category: [[annotation]] | |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[SJ08276]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | |
| − | * Gene: [[SJ21859]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | |
| − | * Gene: [[SJ05858]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | </div>
| |
| − | == Pathway(s) == | |
| − | * [[PWY66-375]], leukotriene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-375 PWY66-375] | |
| − | ** '''5''' reactions found over '''6''' reactions in the full pathway
| |
| − | == Reconstruction information ==
| |
| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | == External links ==
| |
| − | * RHEA:
| |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17486 17486]
| |
| − | * LIGAND-RXN:
| |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R01595 R01595]
| |
| − | * UNIPROT:
| |
| − | ** [http://www.uniprot.org/uniprot/P12527 P12527]
| |
| − | ** [http://www.uniprot.org/uniprot/P09917 P09917]
| |
| − | ** [http://www.uniprot.org/uniprot/Q7M0C1 Q7M0C1]
| |
| − | {{#set: direction=left-to-right}} | |
| − | {{#set: common-name=arachidonate 5-lipoxygenase}} | |
| − | {{#set: synonymous=leukotriene a4 synthase|δ5-lipoxygenase|5δ-lipoxygenase|arachidonic acid 5-lipoxygenase|arachidonic 5-lipoxygenase|lta synthase|leukotriene-a4 synthase|c-5-lipoxygenase}}
| |
| − | {{#set: nb gene associated=11}} | |
| − | {{#set: nb pathway associated=1}}
| |
| − | {{#set: reconstruction category=annotation}}
| |
| − | {{#set: reconstruction tool=pathwaytools}}
| |
| − | {{#set: reconstruction comment=n.a}} | |
| − | {{#set: reconstruction source=saccharina_japonica_genome}} | |
