Difference between revisions of "GDRm"

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(Created page with "Category:reaction == Reaction 3-ISOPROPYLMALISOM-RXN == * direction: ** reversible * common-name: ** 3-isopropylmalate dehydratase ** (2s)-2-isopropylmalate hydro-lyase (2...")
(Created page with "Category:reaction == Reaction GDRm == * direction: ** left-to-right * common-name: ** glutathione-disulfide reductase, mitochondria == Reaction formula == * 1.0 NADH[m...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction 3-ISOPROPYLMALISOM-RXN ==
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== Reaction GDRm ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** 3-isopropylmalate dehydratase
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** glutathione-disulfide reductase, mitochondria
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** (2s)-2-isopropylmalate hydro-lyase (2-isopropylmaleate-forming)
 
−
* synonymous:
 
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** 3-isopropylmalate hydro-lyase
 
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** β-isopropylmalate dehydratase
 
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** α-isopropylmalate isomerase
 
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** (2r,3s)-3-isopropylmalate hydro-lyase
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[CPD-9451]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[3-CARBOXY-3-HYDROXY-ISOCAPROATE]][c]
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* 1.0 [[NADH]][m] '''+''' 1.0 [[OXIDIZED-GLUTATHIONE]][m] '''+''' 1.0 [[PROTON]][m] '''=>''' 2.0 [[GLUTATHIONE]][m] '''+''' 1.0 [[NAD]][m]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ22396]]
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* Gene: [[SJ17355]]
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ09771]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[LEUSYN-PWY]], L-leucine biosynthesis:
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6871]], 3-methylbutanol biosynthesis (engineered):
 
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** '''5''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: direction=left-to-right}}
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* METANETX-RXN : MNXR100826
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{{#set: common-name=glutathione-disulfide reductase, mitochondria}}
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* RHEA:
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{{#set: nb gene associated=1}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16296 16296]
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{{#set: nb pathway associated=0}}
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* LIGAND-RXN:
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{{#set: reconstruction category=orthology}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03968 R03968]
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{{#set: reconstruction tool=pantograph}}
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/Q9PLW1 Q9PLW1]
 
−
** [http://www.uniprot.org/uniprot/Q9JU82 Q9JU82]
 
−
** [http://www.uniprot.org/uniprot/P80858 P80858]
 
−
** [http://www.uniprot.org/uniprot/Q9UZ07 Q9UZ07]
 
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** [http://www.uniprot.org/uniprot/Q9JU81 Q9JU81]
 
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** [http://www.uniprot.org/uniprot/Q58673 Q58673]
 
−
** [http://www.uniprot.org/uniprot/Q02144 Q02144]
 
−
** [http://www.uniprot.org/uniprot/P44968 P44968]
 
−
** [http://www.uniprot.org/uniprot/Q58667 Q58667]
 
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** [http://www.uniprot.org/uniprot/P44438 P44438]
 
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** [http://www.uniprot.org/uniprot/P0A6A6 P0A6A6]
 
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** [http://www.uniprot.org/uniprot/Q9PLW2 Q9PLW2]
 
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** [http://www.uniprot.org/uniprot/Q44022 Q44022]
 
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** [http://www.uniprot.org/uniprot/Q44023 Q44023]
 
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** [http://www.uniprot.org/uniprot/Q44427 Q44427]
 
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** [http://www.uniprot.org/uniprot/P17279 P17279]
 
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** [http://www.uniprot.org/uniprot/P04787 P04787]
 
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** [http://www.uniprot.org/uniprot/P15717 P15717]
 
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** [http://www.uniprot.org/uniprot/P18250 P18250]
 
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** [http://www.uniprot.org/uniprot/Q02142 Q02142]
 
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** [http://www.uniprot.org/uniprot/P30126 P30126]
 
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** [http://www.uniprot.org/uniprot/P50181 P50181]
 
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** [http://www.uniprot.org/uniprot/P07264 P07264]
 
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** [http://www.uniprot.org/uniprot/P74207 P74207]
 
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** [http://www.uniprot.org/uniprot/O86534 O86534]
 
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** [http://www.uniprot.org/uniprot/O86535 O86535]
 
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</div>
 
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{{#set: direction=reversible}}
 
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{{#set: common-name=(2s)-2-isopropylmalate hydro-lyase (2-isopropylmaleate-forming)|3-isopropylmalate dehydratase}}
 
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{{#set: synonymous=(2r,3s)-3-isopropylmalate hydro-lyase|3-isopropylmalate hydro-lyase|&beta;-isopropylmalate dehydratase|&alpha;-isopropylmalate isomerase}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=2}}
 
−
{{#set: reconstruction category=orthology|annotation}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Latest revision as of 11:21, 18 March 2021

Reaction GDRm

  • direction:
    • left-to-right
  • common-name:
    • glutathione-disulfide reductase, mitochondria

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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