Difference between revisions of "GERANYLGERANYL-PP"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9679 RXN-9679] == * direction: ** left-to-right * common-name: ** sarcosine n-methyltransferase...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18204 RXN-18204] == * direction: ** reversible == Reaction formula == * 1 CPDQT-38[c] '''+'...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9679 RXN-9679] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-18204 RXN-18204] ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* common-name:
 
−
** sarcosine n-methyltransferase
 
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** sarcosine-dimethylglycine methyltransferase
 
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* synonymous:
 
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** glycine-sarcosine methyltransferase
 
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** sdmt
 
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** s-adenosyl-l-methionine:n,n-dimethylglycine n-methyltransferase
 
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** gmt
 
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** apgsmt
 
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** gsdmt
 
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** glycine sarcosine dimethylglycine n-methyltransferase
 
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** s-adenosyl-l-methionine:sarcosine n-methyltransferase
 
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** apdmt
 
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** glycine sarcosine n-methyltransferase
 
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** sarcosine dimethylglycine n-methyltransferase
 
−
** gsmt
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[SARCOSINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[DIMETHYL-GLYCINE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPDQT-38]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[CPD-19489]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ21291]]
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* Gene: [[SJ11087]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ12128]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ02540]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ02539]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ12119]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ10116]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ12116]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ03081]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ18177]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ12118]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ14716]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[P541-PWY]], glycine betaine biosynthesis IV (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=P541-PWY P541-PWY]
+
* [[PWYQT-4450]], aliphatic glucosinolate biosynthesis, side chain elongation cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4450 PWYQT-4450]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''5''' reactions found over '''30''' reactions in the full pathway
−
* [[PWY-6004]], glycine betaine biosynthesis V (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6004 PWY-6004]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
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{{#set: direction=reversible}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15454 15454]
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{{#set: nb gene associated=1}}
−
* LIGAND-RXN:
+
{{#set: nb pathway associated=1}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07243 R07243]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=sarcosine-dimethylglycine methyltransferase|sarcosine n-methyltransferase}}
 
−
{{#set: synonymous=glycine-sarcosine methyltransferase|gmt|sarcosine dimethylglycine n-methyltransferase|gsmt|s-adenosyl-l-methionine:n,n-dimethylglycine n-methyltransferase|apdmt|gsdmt|glycine sarcosine dimethylglycine n-methyltransferase|glycine sarcosine n-methyltransferase|apgsmt|sdmt|s-adenosyl-l-methionine:sarcosine n-methyltransferase}}
 
−
{{#set: nb gene associated=11}}
 
−
{{#set: nb pathway associated=2}}
 
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 14:24, 26 August 2019

Reaction RXN-18204

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWYQT-4450, aliphatic glucosinolate biosynthesis, side chain elongation cycle: PWYQT-4450
    • 5 reactions found over 30 reactions in the full pathway

Reconstruction information

External links

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