Difference between revisions of "GLUC1PURIDYLTRANS-RXN"

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(Created page with "Category:reaction == Reaction PHOSPHOGLUCMUT-RXN == * direction: ** reversible * common-name: ** phosphoglucomutase * ec-number: ** [http://enzyme.expasy.org/EC/5.4.2.2 ec...")
(Created page with "Category:reaction == Reaction GLUC1PURIDYLTRANS-RXN == * direction: ** reversible * common-name: ** utp:glucose-1-phosphate uridylyltransferase * ec-number: ** [http://enz...")
 
(4 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PHOSPHOGLUCMUT-RXN ==
+
== Reaction GLUC1PURIDYLTRANS-RXN ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
−
** phosphoglucomutase
+
** utp:glucose-1-phosphate uridylyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.4.2.2 ec-5.4.2.2]
+
** [http://enzyme.expasy.org/EC/2.7.7.64 ec-2.7.7.64]
 +
** [http://enzyme.expasy.org/EC/2.7.7.9 ec-2.7.7.9]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GLC-1-P]][c] '''<=>''' 1 [[D-glucopyranose-6-phosphate]][c]
+
* 1 [[GLC-1-P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UTP]][c] '''<=>''' 1 [[CPD-12575]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05004]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ06954]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ18341]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08662]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ12510]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ05850]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ02279]]
+
* Gene: [[SJ10502]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ12467]]
+
* Gene: [[SJ18341]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus):
−
* [[PWY-6737]], starch degradation V:
+
** '''6''' reactions found over '''16''' reactions in the full pathway
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
* [[PWY-7238]], sucrose biosynthesis II:
 
* [[PWY-7238]], sucrose biosynthesis II:
 
** '''5''' reactions found over '''8''' reactions in the full pathway
 
** '''5''' reactions found over '''8''' reactions in the full pathway
−
* [[GLYCOGENSYNTH-PWY]], glycogen biosynthesis I (from ADP-D-Glucose):
+
* [[PWY-6527]], stachyose degradation:
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
−
* [[GLUCOSE1PMETAB-PWY]], glucose and glucose-1-phosphate degradation:
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7900]], glycogen biosynthesis III (from &alpha;-maltose 1-phosphate):
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6731]], starch degradation III:
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5941]], glycogen degradation II:
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[GLYCOCAT-PWY]], glycogen degradation I:
 
−
** '''6''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-622]], starch biosynthesis:
 
−
** '''2''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6317]], D-galactose degradation I (Leloir pathway):
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-2723]], trehalose degradation V:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
* [[PWY-3801]], sucrose degradation II (sucrose synthase):
 
* [[PWY-3801]], sucrose degradation II (sucrose synthase):
 
** '''4''' reactions found over '''5''' reactions in the full pathway
 
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7343]], UDP-&alpha;-D-glucose biosynthesis I:
+
* [[PWY-7343]], UDP-&alpha;-D-glucose biosynthesis:
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5940]], streptomycin biosynthesis:
 
−
** '''2''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY-7902]], glucosylglycerol biosynthesis:
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5384]], sucrose degradation IV (sucrose phosphorylase):
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5661]], GDP-glucose biosynthesis:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY66-422]]:
 
−
** '''5''' reactions found over '''n.a''' reactions in the full pathway
 
−
</div>
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR143121
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23539 23539]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19892 19892]
 
* PIR:
 
* PIR:
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A41801 A41801]
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A40650 A40650]
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A53614 A53614]
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A41382 A41382]
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=B53614 B53614]
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A56146 A56146]
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=E70650 E70650]
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A64250 A64250]
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G64803 G64803]
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A64970 A64970]
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G81947 G81947]
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A75096 A75096]
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I39487 I39487]
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D49349 D49349]
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I41215 I41215]
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D69184 D69184]
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=PMRB PMRB]
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D70601 D70601]
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=PMRBI PMRBI]
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=E64466 E64466]
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=PMRT PMRT]
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=E71913 E71913]
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S10741 S10741]
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=F59102 F59102]
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S39397 S39397]
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=F64600 F64600]
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S41199 S41199]
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=F81300 F81300]
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S41200 S41200]
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G64095 G64095]
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S76847 S76847]
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G70125 G70125]
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S78440 S78440]
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H70446 H70446]
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T04326 T04326]
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC2265 JC2265]
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T04327 T04327]
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4785 JC4785]
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T12574 T12574]
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4985 JC4985]
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52656 T52656]
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JX0277 JX0277]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S15298 S15298]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S30007 S30007]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S31431 S31431]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S35692 S35692]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S41533 S41533]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S62599 S62599]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S73501 S73501]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S78541 S78541]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T42521 T42521]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T44841 T44841]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T45453 T45453]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XNDOU XNDOU]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XNPOU XNPOU]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P36871 P36871]
+
** [http://www.uniprot.org/uniprot/Q05852 Q05852]
−
** [http://www.uniprot.org/uniprot/P40390 P40390]
+
** [http://www.uniprot.org/uniprot/P27897 P27897]
−
** [http://www.uniprot.org/uniprot/P40391 P40391]
+
** [http://www.uniprot.org/uniprot/Q48447 Q48447]
−
** [http://www.uniprot.org/uniprot/P95090 P95090]
+
** [http://www.uniprot.org/uniprot/P47691 P47691]
−
** [http://www.uniprot.org/uniprot/P36938 P36938]
+
** [http://www.uniprot.org/uniprot/P0AAB6 P0AAB6]
−
** [http://www.uniprot.org/uniprot/P57002 P57002]
+
** [http://www.uniprot.org/uniprot/Q9UZI7 Q9UZI7]
−
** [http://www.uniprot.org/uniprot/P38569 P38569]
+
** [http://www.uniprot.org/uniprot/P33696 P33696]
−
** [http://www.uniprot.org/uniprot/P31120 P31120]
+
** [http://www.uniprot.org/uniprot/O26731 O26731]
−
** [http://www.uniprot.org/uniprot/P00949 P00949]
+
** [http://www.uniprot.org/uniprot/O05576 O05576]
−
** [http://www.uniprot.org/uniprot/P38652 P38652]
+
** [http://www.uniprot.org/uniprot/Q58730 Q58730]
−
** [http://www.uniprot.org/uniprot/Q7M2K5 Q7M2K5]
+
** [http://www.uniprot.org/uniprot/Q9ZLI8 Q9ZLI8]
−
** [http://www.uniprot.org/uniprot/Q16106 Q16106]
+
** [http://www.uniprot.org/uniprot/Q9X364 Q9X364]
−
** [http://www.uniprot.org/uniprot/P33401 P33401]
+
** [http://www.uniprot.org/uniprot/O25363 O25363]
−
** [http://www.uniprot.org/uniprot/P37012 P37012]
+
** [http://www.uniprot.org/uniprot/Q9PMD3 Q9PMD3]
−
** [http://www.uniprot.org/uniprot/P74643 P74643]
+
** [http://www.uniprot.org/uniprot/P44878 P44878]
−
** [http://www.uniprot.org/uniprot/Q51847 Q51847]
+
** [http://www.uniprot.org/uniprot/O51225 O51225]
−
** [http://www.uniprot.org/uniprot/P93804 P93804]
+
** [http://www.uniprot.org/uniprot/O67602 O67602]
−
** [http://www.uniprot.org/uniprot/P93805 P93805]
+
** [http://www.uniprot.org/uniprot/P0AEP3 P0AEP3]
−
** [http://www.uniprot.org/uniprot/P93262 P93262]
+
** [http://www.uniprot.org/uniprot/Q43772 Q43772]
−
** [http://www.uniprot.org/uniprot/Q9SCY0 Q9SCY0]
+
** [http://www.uniprot.org/uniprot/P74969 P74969]
 +
** [http://www.uniprot.org/uniprot/Q07130 Q07130]
 +
** [http://www.uniprot.org/uniprot/P32861 P32861]
 +
** [http://www.uniprot.org/uniprot/P19595 P19595]
 +
** [http://www.uniprot.org/uniprot/Q07131 Q07131]
 +
** [http://www.uniprot.org/uniprot/P37776 P37776]
 +
** [http://www.uniprot.org/uniprot/P75124 P75124]
 +
** [http://www.uniprot.org/uniprot/Q46768 Q46768]
 +
** [http://www.uniprot.org/uniprot/P78811 P78811]
 +
** [http://www.uniprot.org/uniprot/Q9RMC3 Q9RMC3]
 +
** [http://www.uniprot.org/uniprot/Q9Z5G1 Q9Z5G1]
 +
** [http://www.uniprot.org/uniprot/P08800 P08800]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00959 R00959]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00289 R00289]
 
</div>
 
</div>
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=phosphoglucomutase}}
+
{{#set: common-name=utp:glucose-1-phosphate uridylyltransferase}}
−
{{#set: ec-number=ec-5.4.2.2}}
+
{{#set: ec-number=ec-2.7.7.64|ec-2.7.7.9}}
 
{{#set: nb gene associated=5}}
 
{{#set: nb gene associated=5}}
−
{{#set: nb pathway associated=18}}
+
{{#set: nb pathway associated=5}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction GLUC1PURIDYLTRANS-RXN

  • direction:
    • reversible
  • common-name:
    • utp:glucose-1-phosphate uridylyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7817, type I lipoteichoic acid biosynthesis (S. aureus):
    • 6 reactions found over 16 reactions in the full pathway
  • PWY-7238, sucrose biosynthesis II:
    • 5 reactions found over 8 reactions in the full pathway
  • PWY-6527, stachyose degradation:
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-3801, sucrose degradation II (sucrose synthase):
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7343, UDP-α-D-glucose biosynthesis:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=GLUC1PURIDYLTRANS-RXN&oldid=140775"