Difference between revisions of "GLUCONATE-5-DEHYDROGENASE-RXN"

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(Created page with "Category:reaction == Reaction HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN == * direction: ** left-to-right * common-name: ** s-adenosyl-l-methionine:l-homocysteine s-methyltransf...")
(Created page with "Category:reaction == Reaction GLUCONATE-5-DEHYDROGENASE-RXN == * direction: ** left-to-right * common-name: ** 5-keto-d-gluconate 5-reductase * ec-number: ** [http://enzym...")
 
(3 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN ==
+
== Reaction GLUCONATE-5-DEHYDROGENASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** s-adenosyl-l-methionine:l-homocysteine s-methyltransferase
+
** 5-keto-d-gluconate 5-reductase
−
** s-adenosylmethionine-homocysteine s-methyltransferase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1 ec-2.1.1]
+
** [http://enzyme.expasy.org/EC/1.1.1.69 ec-1.1.1.69]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[HOMO-CYS]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[MET]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[5-DEHYDROGLUCONATE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[GLUCONATE]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03226]]
+
* Gene: [[SJ04229]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ07112]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-702]], L-methionine biosynthesis II (plants):
+
* [[IDNCAT-PWY]], L-idonate degradation:
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR115916
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21821 21821]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23938 23938]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00650 R00650]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01740 R01740]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9M1W4 Q9M1W4]
+
** [http://www.uniprot.org/uniprot/P50199 P50199]
−
** [http://www.uniprot.org/uniprot/Q9SDL7 Q9SDL7]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=s-adenosyl-l-methionine:l-homocysteine s-methyltransferase|s-adenosylmethionine-homocysteine s-methyltransferase}}
+
{{#set: common-name=5-keto-d-gluconate 5-reductase}}
−
{{#set: ec-number=ec-2.1.1}}
+
{{#set: ec-number=ec-1.1.1.69}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:18, 18 March 2021

Reaction GLUCONATE-5-DEHYDROGENASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • 5-keto-d-gluconate 5-reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • IDNCAT-PWY, L-idonate degradation:
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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