Difference between revisions of "GLUCONATE-5-DEHYDROGENASE-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.8.15-RXN 2.7.8.15-RXN] == * direction: ** left-to-right * common-name: ** udp-n-acetylglucosami...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHONDROITIN-4-SULFOTRANSFERASE-RXN CHONDROITIN-4-SULFOTRANSFERASE-RXN] == * direction: ** left-to-r...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.8.15-RXN 2.7.8.15-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHONDROITIN-4-SULFOTRANSFERASE-RXN CHONDROITIN-4-SULFOTRANSFERASE-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** udp-n-acetylglucosamine—dolichyl-phosphate n-acetylglucosaminephosphotransferase
+
** chondroitin 4-sulfotransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.8.15 ec-2.7.8.15]
+
** [http://enzyme.expasy.org/EC/2.8.2.5 ec-2.8.2.5]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DOLICHOLP]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''=>''' 1 [[CPD-190]][c] '''+''' 1 [[UMP]][c]
+
* 1 [[Chondroitin-N-acetyl-galactosamines]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[CHONDROITIN-4-SULFATE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ02910]]
+
* Gene: [[SJ00043]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation initial phase (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
+
* [[PWY-6567]], chondroitin sulfate biosynthesis (late stages): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6567 PWY-6567]
−
** '''16''' reactions found over '''19''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13289 13289]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16102 16102]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01007 R01007]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02180 R02180]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P07286 P07286]
+
** [http://www.uniprot.org/uniprot/Q9NPF2 Q9NPF2]
−
** [http://www.uniprot.org/uniprot/P23338 P23338]
 
−
** [http://www.uniprot.org/uniprot/P42864 P42864]
 
−
** [http://www.uniprot.org/uniprot/P39465 P39465]
 
−
** [http://www.uniprot.org/uniprot/Q9UY90 Q9UY90]
 
−
** [http://www.uniprot.org/uniprot/Q58513 Q58513]
 
−
** [http://www.uniprot.org/uniprot/P42867 P42867]
 
−
** [http://www.uniprot.org/uniprot/P42881 P42881]
 
−
** [http://www.uniprot.org/uniprot/P96000 P96000]
 
−
** [http://www.uniprot.org/uniprot/Q9M2M5 Q9M2M5]
 
−
** [http://www.uniprot.org/uniprot/O22211 O22211]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=udp-n-acetylglucosamine—dolichyl-phosphate n-acetylglucosaminephosphotransferase}}
+
{{#set: common-name=chondroitin 4-sulfotransferase}}
−
{{#set: ec-number=ec-2.7.8.15}}
+
{{#set: ec-number=ec-2.8.2.5}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 14:25, 26 August 2019

Reaction CHONDROITIN-4-SULFOTRANSFERASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • chondroitin 4-sulfotransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6567, chondroitin sulfate biosynthesis (late stages): PWY-6567
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=GLUCONATE-5-DEHYDROGENASE-RXN&oldid=22776"