Difference between revisions of "GLUCONOKIN-RXN"

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(Created page with "Category:reaction == Reaction TRANSALDOL-RXN == * direction: ** reversible * common-name: ** transaldolase * ec-number: ** [http://enzyme.expasy.org/EC/2.2.1.2 ec-2.2.1.2]...")
(Created page with "Category:reaction == Reaction RXN-17016 == * direction: ** left-to-right * common-name: ** acyl-acp:sn-glycerol-3-phosphate 1-o-acyltransferase (glycerol-3-phosphate acylt...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction TRANSALDOL-RXN ==
+
== Reaction RXN-17016 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** transaldolase
+
** acyl-acp:sn-glycerol-3-phosphate 1-o-acyltransferase (glycerol-3-phosphate acyltransferase)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.2.1.2 ec-2.2.1.2]
+
** [http://enzyme.expasy.org/EC/2.3.1.15 ec-2.3.1.15]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[D-SEDOHEPTULOSE-7-P]][c] '''+''' 1 [[GAP]][c] '''<=>''' 1 [[ERYTHROSE-4P]][c] '''+''' 1 [[FRUCTOSE-6P]][c]
+
* 1 [[Cis-vaccenoyl-ACPs]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[CPD-18348]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ12204]]
+
* Gene: [[SJ18504]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ11668]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ18265]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-1861]], formaldehyde assimilation II (assimilatory RuMP Cycle):
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[P124-PWY]], Bifidobacterium shunt:
 
−
** '''12''' reactions found over '''15''' reactions in the full pathway
 
−
* [[P185-PWY]], formaldehyde assimilation III (dihydroxyacetone cycle):
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[NONOXIPENT-PWY]], pentose phosphate pathway (non-oxidative branch):
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5723]], Rubisco shunt:
 
−
** '''10''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
{{#set: direction=left-to-right}}
−
* RHEA:
+
{{#set: common-name=acyl-acp:sn-glycerol-3-phosphate 1-o-acyltransferase (glycerol-3-phosphate acyltransferase)}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17056 17056]
+
{{#set: ec-number=ec-2.3.1.15}}
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01827 R01827]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P17441 P17441]
 
−
** [http://www.uniprot.org/uniprot/P17440 P17440]
 
−
** [http://www.uniprot.org/uniprot/P37837 P37837]
 
−
** [http://www.uniprot.org/uniprot/P45055 P45055]
 
−
** [http://www.uniprot.org/uniprot/Q9JSU1 Q9JSU1]
 
−
** [http://www.uniprot.org/uniprot/P0A867 P0A867]
 
−
** [http://www.uniprot.org/uniprot/Q9PIL5 Q9PIL5]
 
−
** [http://www.uniprot.org/uniprot/Q58370 Q58370]
 
−
** [http://www.uniprot.org/uniprot/P34214 P34214]
 
−
** [http://www.uniprot.org/uniprot/P0A870 P0A870]
 
−
** [http://www.uniprot.org/uniprot/P15019 P15019]
 
−
** [http://www.uniprot.org/uniprot/P53228 P53228]
 
−
** [http://www.uniprot.org/uniprot/P51778 P51778]
 
−
** [http://www.uniprot.org/uniprot/P72797 P72797]
 
−
** [http://www.uniprot.org/uniprot/O04894 O04894]
 
−
** [http://www.uniprot.org/uniprot/P78865 P78865]
 
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=transaldolase}}
 
−
{{#set: ec-number=ec-2.2.1.2}}
 
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:14, 14 January 2021

Reaction RXN-17016

  • direction:
    • left-to-right
  • common-name:
    • acyl-acp:sn-glycerol-3-phosphate 1-o-acyltransferase (glycerol-3-phosphate acyltransferase)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=GLUCONOKIN-RXN&oldid=88146"