Difference between revisions of "GLUCONOLACT-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1133 RXN0-1133] == * direction: ** left-to-right * common-name: ** lipoate acetyltransferase *...")
 
(Created page with "Category:reaction == Reaction GLUCONOLACT-RXN == * direction: ** left-to-right * common-name: ** gluconolactonase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.1.17 ec-...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1133 RXN0-1133] ==
+
== Reaction GLUCONOLACT-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** lipoate acetyltransferase
+
** gluconolactonase
−
** pyruvate dehydrogenase (nad+)
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.12 ec-2.3.1.12]
+
** [http://enzyme.expasy.org/EC/3.1.1.17 ec-3.1.1.17]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CO-A]][c] '''+''' 1 [[Pyruvate-dehydrogenase-acetylDHlipoyl]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[Pyruvate-dehydrogenase-dihydrolipoate]][c]
+
* 1 [[GLC-D-LACTONE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLUCONATE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ05433]]
−
* Gene: [[SJ00971]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ17268]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ10087]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ10725]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ01042]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ10792]]
+
* Gene: [[SJ19511]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ13527]]
+
* Gene: [[SJ05432]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PYRUVDEHYD-PWY]], pyruvate decarboxylation to acetyl CoA: [http://metacyc.org/META/NEW-IMAGE?object=PYRUVDEHYD-PWY PYRUVDEHYD-PWY]
+
* [[GLUCOSE1PMETAB-PWY]], glucose and glucose-1-phosphate degradation:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[DHGLUCONATE-PYR-CAT-PWY]], glucose degradation (oxidative):
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-2221]], Entner-Doudoroff pathway III (semi-phosphorylative):
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[NPGLUCAT-PWY]], Entner-Doudoroff pathway II (non-phosphorylative):
 +
** '''4''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5530]], sorbitol biosynthesis II:
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7165]], L-ascorbate biosynthesis VIII (engineered pathway):
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR107037
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10441 10441]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02569 R02569]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01519 R01519]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q01991 Q01991]
+
** [http://www.uniprot.org/uniprot/Q01578 Q01578]
−
** [http://www.uniprot.org/uniprot/P12695 P12695]
 
−
** [http://www.uniprot.org/uniprot/Q7M2M8 Q7M2M8]
 
−
** [http://www.uniprot.org/uniprot/P10515 P10515]
 
−
** [http://www.uniprot.org/uniprot/Q39082 Q39082]
 
−
** [http://www.uniprot.org/uniprot/Q9TRP7 Q9TRP7]
 
−
** [http://www.uniprot.org/uniprot/Q7M0X6 Q7M0X6]
 
−
** [http://www.uniprot.org/uniprot/Q59098 Q59098]
 
−
** [http://www.uniprot.org/uniprot/Q9PF09 Q9PF09]
 
−
** [http://www.uniprot.org/uniprot/P35489 P35489]
 
−
** [http://www.uniprot.org/uniprot/P21883 P21883]
 
−
** [http://www.uniprot.org/uniprot/Q59658 Q59658]
 
−
** [http://www.uniprot.org/uniprot/Q9JU07 Q9JU07]
 
−
** [http://www.uniprot.org/uniprot/Q59298 Q59298]
 
−
** [http://www.uniprot.org/uniprot/P45118 P45118]
 
−
** [http://www.uniprot.org/uniprot/Q54102 Q54102]
 
−
** [http://www.uniprot.org/uniprot/P11961 P11961]
 
−
** [http://www.uniprot.org/uniprot/Q59821 Q59821]
 
−
** [http://www.uniprot.org/uniprot/P08461 P08461]
 
−
** [http://www.uniprot.org/uniprot/Q16791 Q16791]
 
−
** [http://www.uniprot.org/uniprot/Q41737 Q41737]
 
−
** [http://www.uniprot.org/uniprot/O64968 O64968]
 
−
** [http://www.uniprot.org/uniprot/P10802 P10802]
 
−
** [http://www.uniprot.org/uniprot/P06959 P06959]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=pyruvate dehydrogenase (nad+)|lipoate acetyltransferase}}
+
{{#set: common-name=gluconolactonase}}
−
{{#set: ec-number=ec-2.3.1.12}}
+
{{#set: ec-number=ec-3.1.1.17}}
−
{{#set: nb gene associated=7}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=6}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction GLUCONOLACT-RXN

  • direction:
    • left-to-right
  • common-name:
    • gluconolactonase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • GLUCOSE1PMETAB-PWY, glucose and glucose-1-phosphate degradation:
    • 3 reactions found over 5 reactions in the full pathway
  • DHGLUCONATE-PYR-CAT-PWY, glucose degradation (oxidative):
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-2221, Entner-Doudoroff pathway III (semi-phosphorylative):
    • 6 reactions found over 9 reactions in the full pathway
  • NPGLUCAT-PWY, Entner-Doudoroff pathway II (non-phosphorylative):
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-5530, sorbitol biosynthesis II:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7165, L-ascorbate biosynthesis VIII (engineered pathway):
    • 1 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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