Difference between revisions of "GLUTACONYL-COA-DECARBOXYLASE-RXN"

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(Created page with "Category:reaction == Reaction HACD7h == * direction: ** reversible * common-name: ** 3-hydroxyacyl-coa dehydrogenase (c16:0) == Reaction formula == * 1.0 3-OXOPALMITOYL-...")
(Created page with "Category:reaction == Reaction GLUTACONYL-COA-DECARBOXYLASE-RXN == * direction: ** reversible * common-name: ** glutaconyl-coa decarboxylase * ec-number: ** [http://enzyme....")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction HACD7h ==
+
== Reaction GLUTACONYL-COA-DECARBOXYLASE-RXN ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
−
** 3-hydroxyacyl-coa dehydrogenase (c16:0)
+
** glutaconyl-coa decarboxylase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/4.1.1.70 ec-4.1.1.70]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[3-OXOPALMITOYL-COA]][h] '''+''' 1.0 [[NADH]][h] '''+''' 1.0 [[PROTON]][h] '''<=>''' 1.0 [[CPD0-2232]][h] '''+''' 1.0 [[NAD]][h]
+
* 1 [[GLUTACONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CROTONYL-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03584]]
+
* Gene: [[SJ07909]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ21390]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7401]], crotonate fermentation (to acetate and cyclohexane carboxylate):
 +
** '''6''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-5177]], glutaryl-CoA degradation:
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[P162-PWY]], L-glutamate degradation V (via hydroxyglutarate):
 +
** '''7''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR107899
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23972 23972]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03028 R03028]
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=3-hydroxyacyl-coa dehydrogenase (c16:0)}}
+
{{#set: common-name=glutaconyl-coa decarboxylase}}
−
{{#set: nb gene associated=2}}
+
{{#set: ec-number=ec-4.1.1.70}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb gene associated=1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction GLUTACONYL-COA-DECARBOXYLASE-RXN

  • direction:
    • reversible
  • common-name:
    • glutaconyl-coa decarboxylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7401, crotonate fermentation (to acetate and cyclohexane carboxylate):
    • 6 reactions found over 15 reactions in the full pathway
  • PWY-5177, glutaryl-CoA degradation:
    • 5 reactions found over 5 reactions in the full pathway
  • P162-PWY, L-glutamate degradation V (via hydroxyglutarate):
    • 7 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR107899
  • RHEA:
  • LIGAND-RXN:





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