Difference between revisions of "GLUTACONYL-COA-DECARBOXYLASE-RXN"

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(Created page with "Category:reaction == Reaction RXN-10662 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.1.2 ec-3.1.2] == Reaction formula == * 1 CPD-1026...")
(Created page with "Category:reaction == Reaction GLYCEROL-KIN-RXN == * direction: ** reversible * common-name: ** glycerol kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.30 ec-2.7...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-10662 ==
+
== Reaction GLYCEROL-KIN-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 +
* common-name:
 +
** glycerol kinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.2 ec-3.1.2]
+
** [http://enzyme.expasy.org/EC/2.7.1.30 ec-2.7.1.30]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-10269]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CPD-9245]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[GLYCEROL]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ11594]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ11595]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-4261]], glycerol degradation I:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=left-to-right}}
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: ec-number=ec-3.1.2}}
+
* RHEA:
−
{{#set: nb gene associated=0}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21647 21647]
−
{{#set: nb pathway associated=0}}
+
* LIGAND-RXN:
−
{{#set: reconstruction category=gap-filling}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00847 R00847]
−
{{#set: reconstruction tool=meneco}}
+
* UNIPROT:
−
{{#set: reconstruction comment=added for gapfilling}}
+
** [http://www.uniprot.org/uniprot/P18157 P18157]
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
** [http://www.uniprot.org/uniprot/P47284 P47284]
 +
** [http://www.uniprot.org/uniprot/Q9CG64 Q9CG64]
 +
** [http://www.uniprot.org/uniprot/Q9V207 Q9V207]
 +
** [http://www.uniprot.org/uniprot/P44400 P44400]
 +
** [http://www.uniprot.org/uniprot/Q9WX53 Q9WX53]
 +
** [http://www.uniprot.org/uniprot/Q7M0X5 Q7M0X5]
 +
** [http://www.uniprot.org/uniprot/P0A6F3 P0A6F3]
 +
** [http://www.uniprot.org/uniprot/P25013 P25013]
 +
** [http://www.uniprot.org/uniprot/P19255 P19255]
 +
** [http://www.uniprot.org/uniprot/P32190 P32190]
 +
** [http://www.uniprot.org/uniprot/P32189 P32189]
 +
** [http://www.uniprot.org/uniprot/P95907 P95907]
 +
** [http://www.uniprot.org/uniprot/Q49011 Q49011]
 +
** [http://www.uniprot.org/uniprot/O93623 O93623]
 +
</div>
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=glycerol kinase}}
 +
{{#set: ec-number=ec-2.7.1.30}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pathwaytools|pantograph}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:32, 5 January 2021

Reaction GLYCEROL-KIN-RXN

  • direction:
    • reversible
  • common-name:
    • glycerol kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-4261, glycerol degradation I:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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