Difference between revisions of "GLUTAMATE-SYNTHASE-NADH-RXN"

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(Created page with "Category:reaction == Reaction ENOYL-COA-DELTA-ISOM-RXN == * direction: ** reversible * common-name: ** δ3-cis-δ2-trans-enoyl-coa isomerase * ec-number: ** [htt...")
(Created page with "Category:reaction == Reaction GLUTAMATE-SYNTHASE-NADH-RXN == * direction: ** left-to-right * common-name: ** glutamate synthase * ec-number: ** [http://enzyme.expasy.org/E...")
 
(6 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ENOYL-COA-DELTA-ISOM-RXN ==
+
== Reaction GLUTAMATE-SYNTHASE-NADH-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** δ3-cis-δ2-trans-enoyl-coa isomerase
+
** glutamate synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.3.3.8 ec-5.3.3.8]
+
** [http://enzyme.expasy.org/EC/1.4.1.14 ec-1.4.1.14]
−
* synonymous:
 
−
** probable enoyl-coa hydratase/isomerase
 
−
** probable enoyl coa-hydratase/isomerase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CIS-DELTA3-ENOYL-COA]][c] '''<=>''' 1 [[TRANS-D2-ENOYL-COA]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 2 [[GLT]][c] '''+''' 1 [[NAD]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ22166]]
+
* Gene: [[SJ10812]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ07211]]
+
* Gene: [[SJ10813]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ11169]]
+
* Gene: [[SJ20190]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ04922]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5137]], fatty acid &beta;-oxidation III (unsaturated, odd number):
+
* [[PWY-6963]], ammonia assimilation cycle I:
 +
** '''4''' reactions found over '''2''' reactions in the full pathway
 +
* [[GLUGLNSYN-PWY]], L-glutamate biosynthesis IV:
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[FAO-PWY]], fatty acid &beta;-oxidation I (generic):
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR100289
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13755 13755]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00093 R00093]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P21177 P21177]
+
** [http://www.uniprot.org/uniprot/Q9RXX2 Q9RXX2]
−
** [http://www.uniprot.org/uniprot/P42126 P42126]
+
** [http://www.uniprot.org/uniprot/Q03460 Q03460]
−
** [http://www.uniprot.org/uniprot/P07896 P07896]
+
** [http://www.uniprot.org/uniprot/Q22275 Q22275]
−
** [http://www.uniprot.org/uniprot/P23965 P23965]
+
** [http://www.uniprot.org/uniprot/O61143 O61143]
−
** [http://www.uniprot.org/uniprot/Q64592 Q64592]
+
** [http://www.uniprot.org/uniprot/Q9C102 Q9C102]
−
** [http://www.uniprot.org/uniprot/Q7M0E0 Q7M0E0]
+
** [http://www.uniprot.org/uniprot/Q9P540 Q9P540]
−
** [http://www.uniprot.org/uniprot/P42125 P42125]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/Q39659 Q39659]
+
{{#set: common-name=glutamate synthase}}
−
{{#set: direction=reversible}}
+
{{#set: ec-number=ec-1.4.1.14}}
−
{{#set: common-name=&delta;3-cis-&delta;2-trans-enoyl-coa isomerase}}
+
{{#set: nb gene associated=4}}
−
{{#set: ec-number=ec-5.3.3.8}}
 
−
{{#set: synonymous=probable enoyl-coa hydratase/isomerase|probable enoyl coa-hydratase/isomerase}}
 
−
{{#set: nb gene associated=3}}
 
 
{{#set: nb pathway associated=2}}
 
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction GLUTAMATE-SYNTHASE-NADH-RXN

  • direction:
    • left-to-right
  • common-name:
    • glutamate synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6963, ammonia assimilation cycle I:
    • 4 reactions found over 2 reactions in the full pathway
  • GLUGLNSYN-PWY, L-glutamate biosynthesis IV:
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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