Difference between revisions of "GLUTAMATESYN-RXN"

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(Created page with "Category:reaction == Reaction KETOACYLCOATHIOL-RXN == * direction: ** left-to-right * common-name: ** acetyl-coa c-acyltransferase ** 3-ketoacyl-coa thiolase * ec-number:...")
(Created page with "Category:reaction == Reaction GLUTAMATESYN-RXN == * direction: ** left-to-right * common-name: ** l-glutamate:nadp+ oxidoreductase (transaminating) * ec-number: ** [http:/...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction KETOACYLCOATHIOL-RXN ==
+
== Reaction GLUTAMATESYN-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** acetyl-coa c-acyltransferase
+
** l-glutamate:nadp+ oxidoreductase (transaminating)
−
** 3-ketoacyl-coa thiolase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.16 ec-2.3.1.16]
+
** [http://enzyme.expasy.org/EC/1.4.1.13 ec-1.4.1.13]
−
* synonymous:
 
−
** beta-ketothiolase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3-KETOACYL-COA]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 2 [[GLT]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ21818]]
+
* Gene: [[SJ20190]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ16470]]
+
* Gene: [[SJ10812]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ21817]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* Gene: [[SJ10813]]
−
* Gene: [[SJ14898]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ09371]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ04922]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7288]], fatty acid β-oxidation VII (yeast peroxisome):
+
* [[GLUTSYN-PWY]], L-glutamate biosynthesis I:
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5136]], fatty acid β-oxidation II (plant peroxisome):
+
* [[GLUTAMINEFUM-PWY]], L-glutamine degradation II:
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[FAO-PWY]], fatty acid β-oxidation I (generic):
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY66-391]], fatty acid β-oxidation VI (mammalian peroxisome):
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR100291
−
* METANETX-RXN : MNXR115993
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21566 21566]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15503 15503]
−
* PIR:
+
* LIGAND-RXN:
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURTAB XURTAB]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00114 R00114]
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURTAA XURTAA]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURT XURT]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XUHUAB XUHUAB]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XUEC XUEC]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52165 T52165]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52110 T52110]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T07989 T07989]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S72532 S72532]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S57792 S57792]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S36838 S36838]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S33637 S33637]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S22784 S22784]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JS0624 JS0624]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H64890 H64890]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P77525 P77525]
+
** [http://www.uniprot.org/uniprot/Q05756 Q05756]
−
** [http://www.uniprot.org/uniprot/P28790 P28790]
+
** [http://www.uniprot.org/uniprot/Q05755 Q05755]
−
** [http://www.uniprot.org/uniprot/P27796 P27796]
+
** [http://www.uniprot.org/uniprot/Q9PJA4 Q9PJA4]
−
** [http://www.uniprot.org/uniprot/Q08375 Q08375]
+
** [http://www.uniprot.org/uniprot/Q9PJA2 Q9PJA2]
−
** [http://www.uniprot.org/uniprot/Q05493 Q05493]
+
** [http://www.uniprot.org/uniprot/Q9CG25 Q9CG25]
−
** [http://www.uniprot.org/uniprot/Q42918 Q42918]
+
** [http://www.uniprot.org/uniprot/Q58746 Q58746]
−
** [http://www.uniprot.org/uniprot/Q43742 Q43742]
+
** [http://www.uniprot.org/uniprot/P09831 P09831]
−
** [http://www.uniprot.org/uniprot/Q56WD9 Q56WD9]
+
** [http://www.uniprot.org/uniprot/Q9CG24 Q9CG24]
−
** [http://www.uniprot.org/uniprot/Q570C8 Q570C8]
+
** [http://www.uniprot.org/uniprot/P09832 P09832]
−
** [http://www.uniprot.org/uniprot/P21151 P21151]
+
** [http://www.uniprot.org/uniprot/P39812 P39812]
−
** [http://www.uniprot.org/uniprot/P09110 P09110]
+
** [http://www.uniprot.org/uniprot/Q9S2Y9 Q9S2Y9]
−
** [http://www.uniprot.org/uniprot/P13437 P13437]
 
−
** [http://www.uniprot.org/uniprot/P21775 P21775]
 
−
** [http://www.uniprot.org/uniprot/P07871 P07871]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00391 R00391]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=acetyl-coa c-acyltransferase|3-ketoacyl-coa thiolase}}
+
{{#set: common-name=l-glutamate:nadp+ oxidoreductase (transaminating)}}
−
{{#set: ec-number=ec-2.3.1.16}}
+
{{#set: ec-number=ec-1.4.1.13}}
−
{{#set: synonymous=beta-ketothiolase}}
+
{{#set: nb gene associated=4}}
−
{{#set: nb gene associated=5}}
+
{{#set: nb pathway associated=2}}
−
{{#set: nb pathway associated=4}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction GLUTAMATESYN-RXN

  • direction:
    • left-to-right
  • common-name:
    • l-glutamate:nadp+ oxidoreductase (transaminating)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • GLUTSYN-PWY, L-glutamate biosynthesis I:
    • 1 reactions found over 2 reactions in the full pathway
  • GLUTAMINEFUM-PWY, L-glutamine degradation II:
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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