Difference between revisions of "GLUTAMIN-RXN"
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(Created page with "Category:reaction == Reaction 3.4.22.34-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.4.22.34 ec-3.4.22.34] == Reaction formula == *...") |
(Created page with "Category:reaction == Reaction GLUTAMIDOTRANS-RXN == * direction: ** left-to-right * common-name: ** imidazoleglycerol-phosphate synthase * ec-number: ** [http://enzyme.exp...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction GLUTAMIDOTRANS-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
| + | * common-name: | ||
| + | ** imidazoleglycerol-phosphate synthase | ||
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/3.4. | + | ** [http://enzyme.expasy.org/EC/4.3.2.m2 ec-4.3.2.m2] |
| + | * synonymous: | ||
| + | ** imidazole glycerol phosphate synthase cyclase subunit (ec 4.1.3.-) | ||
| + | ** imidazole glycerol phosphate synthase amidotransferase subunit (ec 2.4.2.-) | ||
| + | ** imidazole glycerol phosphate synthase cyclase subunit | ||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[GLN]][c] '''+''' 1 [[PHOSPHORIBULOSYL-FORMIMINO-AICAR-P]][c] '''=>''' 1 [[AICAR]][c] '''+''' 1 [[D-ERYTHRO-IMIDAZOLE-GLYCEROL-P]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ19186]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[SJ12953]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[HISTSYN-PWY]], L-histidine biosynthesis: | ||
| + | ** '''10''' reactions found over '''10''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
| − | * | + | * RHEA: |
| − | ** [http://www. | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24793 24793] |
| − | + | * LIGAND-RXN: | |
| − | * | + | ** [http://www.genome.jp/dbget-bin/www_bget?R04558 R04558] |
| − | ** [http://www. | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: ec-number=ec-3.4. | + | {{#set: common-name=imidazoleglycerol-phosphate synthase}} |
| − | {{#set: nb gene associated= | + | {{#set: ec-number=ec-4.3.2.m2}} |
| − | {{#set: nb pathway associated= | + | {{#set: synonymous=imidazole glycerol phosphate synthase amidotransferase subunit (ec 2.4.2.-)|imidazole glycerol phosphate synthase cyclase subunit|imidazole glycerol phosphate synthase cyclase subunit (ec 4.1.3.-)}} |
| − | {{#set: reconstruction category=annotation}} | + | {{#set: nb gene associated=2}} |
| − | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: nb pathway associated=1}} |
| + | {{#set: reconstruction category=annotation|orthology}} | ||
| + | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 19:00, 14 January 2021
Contents
Reaction GLUTAMIDOTRANS-RXN
- direction:
- left-to-right
- common-name:
- imidazoleglycerol-phosphate synthase
- ec-number:
- synonymous:
- imidazole glycerol phosphate synthase cyclase subunit (ec 4.1.3.-)
- imidazole glycerol phosphate synthase amidotransferase subunit (ec 2.4.2.-)
- imidazole glycerol phosphate synthase cyclase subunit
Reaction formula
- 1 GLN[c] + 1 PHOSPHORIBULOSYL-FORMIMINO-AICAR-P[c] => 1 AICAR[c] + 1 D-ERYTHRO-IMIDAZOLE-GLYCEROL-P[c] + 1 GLT[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ19186
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ12953
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
- HISTSYN-PWY, L-histidine biosynthesis:
- 10 reactions found over 10 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
External links
