Difference between revisions of "GLUTARYL-COA-DEHYDROG-RXN"

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(Created page with "Category:reaction == Reaction RXN-14026 == * direction: ** left-to-right * common-name: ** cmp phosphatase ** 5'-nucleotidase * ec-number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:reaction == Reaction D-LACTATE-DEHYDROGENASE-CYTOCHROME-RXN == * direction: ** left-to-right * common-name: ** lactate dehydrogenase ** d-lactate dehydrogenase (c...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-14026 ==
+
== Reaction D-LACTATE-DEHYDROGENASE-CYTOCHROME-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** cmp phosphatase
+
** lactate dehydrogenase
−
** 5'-nucleotidase
+
** d-lactate dehydrogenase (cytochrome)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.3.91 ec-3.1.3.91]
+
** [http://enzyme.expasy.org/EC/1.1.2.4 ec-1.1.2.4]
−
** [http://enzyme.expasy.org/EC/3.1.3.5 ec-3.1.3.5]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CYTIDINE]][c] '''+''' 1 [[Pi]][c]
+
* 2 [[Cytochromes-C-Oxidized]][c] '''+''' 1 [[D-LACTATE]][c] '''=>''' 2 [[Cytochromes-C-Reduced]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[PYRUVATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ21294]]
−
* Gene: [[SJ18895]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ15366]]
+
* Gene: [[SJ20537]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ18402]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ16098]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ09030]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7185]], UTP and CTP dephosphorylation I:
+
* [[MGLDLCTANA-PWY]], methylglyoxal degradation VI:
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13522 13522]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00511 R00511]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00197 R00197]
−
* RHEA:
+
* UNIPROT:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29368 29368]
+
** [http://www.uniprot.org/uniprot/Q12627 Q12627]
 +
** [http://www.uniprot.org/uniprot/P32891 P32891]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=5'-nucleotidase|cmp phosphatase}}
+
{{#set: common-name=d-lactate dehydrogenase (cytochrome)|lactate dehydrogenase}}
−
{{#set: ec-number=ec-3.1.3.5|ec-3.1.3.91}}
+
{{#set: ec-number=ec-1.1.2.4}}
−
{{#set: nb gene associated=5}}
+
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:05, 5 January 2021

Reaction D-LACTATE-DEHYDROGENASE-CYTOCHROME-RXN

  • direction:
    • left-to-right
  • common-name:
    • lactate dehydrogenase
    • d-lactate dehydrogenase (cytochrome)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • MGLDLCTANA-PWY, methylglyoxal degradation VI:
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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